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Related papers: SCP: Accelerating Discovery with a Global Web of A…

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Modern scientific research relies on large-scale data, complex workflows, and specialized tools, which existing LLMs and tool-based agents struggle to handle due to limitations in long-horizon planning, robust goal maintenance, and…

Artificial Intelligence · Computer Science 2026-02-11 NexusAgent Team

This paper introduces Agentic-AI Healthcare, a privacy-aware, multilingual, and explainable research prototype developed as a single-investigator project. The system leverages the emerging Model Context Protocol (MCP) to orchestrate…

Cryptography and Security · Computer Science 2025-10-06 Mohammed A. Shehab

To reduce development overhead and enable seamless integration between potential components comprising any given generative AI application, the Model Context Protocol (MCP) (Anthropic, 2024) has recently been released and subsequently…

Cryptography and Security · Computer Science 2025-04-14 Brandon Radosevich , John Halloran

In many scenarios, such as emergency response or ad hoc collaboration, it is critical to reduce the overhead in integrating data. Ideally, one could perform the entire process interactively under one unified interface: defining extractors…

The AI agent ecosystem has converged on two protocols: the Model Context Protocol (MCP) for tool invocation and Agent-to-Agent (A2A) for single-principal task delegation. Both assume a single controlling principal, meaning one person or…

Multiagent Systems · Computer Science 2026-04-14 Kaiyang Qian , Xinmin Fang , Zhengxiong Li

The Model Context Protocol (MCP), introduced by Anthropic in November 2024 and now governed by the Linux Foundation's Agentic AI Foundation, has rapidly become the de facto standard for connecting large language model (LLM)-based agents to…

Cryptography and Security · Computer Science 2026-04-08 Nirajan Acharya , Gaurav Kumar Gupta

The automation of scientific discovery represents a critical milestone in Artificial Intelligence (AI) research. However, existing agentic systems for science suffer from two fundamental limitations: rigid, pre-programmed workflows that…

Artificial Intelligence · Computer Science 2025-10-20 Ed Li , Junyu Ren , Xintian Pan , Cat Yan , Chuanhao Li , Dirk Bergemann , Zhuoran Yang

Mass spectrometry (MS) based single-cell proteomics (SCP) explores cellular heterogeneity by focusing on the functional effectors of the cells - proteins. However, extracting meaningful biological information from MS data is far from…

Automating science laboratories enables faster, safer, more accurate, and more reproducible execution of protocols, accelerating the discovery and testing of new materials, drugs, and more. However, setting up and running autonomous labs…

Artificial Intelligence · Computer Science 2026-05-19 Angelos Angelopoulos , James F. Cahoon , Ron Alterovitz

Current AI agent architectures suffer from ephemeral memory limitations, preventing effective collaboration and knowledge sharing across sessions and agent boundaries. We introduce SAMEP (Secure Agent Memory Exchange Protocol), a novel…

Artificial Intelligence · Computer Science 2025-07-16 Hari Masoor

With the rapid advancement of artificial intelligence, the proliferation of autonomous agents has introduced new challenges in interoperability, scalability, and coordination. The Internet of Agents (IoA) aims to interconnect heterogeneous…

Multiagent Systems · Computer Science 2025-05-21 Jun Liu , Ke Yu , Keliang Chen , Ke Li , Yuxinyue Qian , Xiaolian Guo , Haozhe Song , Yinming Li

Spatial reasoning, the ability to understand spatial relations, causality, and dynamic evolution, is central to human intelligence and essential for real-world applications such as autonomous driving and robotics. Existing studies, however,…

Computer Vision and Pattern Recognition · Computer Science 2026-04-07 Yanguang Zhao , Jie Yang , Shengqiong Wu , Shutong Hu , Hongbo Qiu , Yu Wang , Guijia Zhang , Tan Kai Ze , Hao Fei , Chia-Wen Lin , Mong-Li Lee , Wynne Hsu

Modern scientific discovery increasingly requires coordinating distributed facilities and heterogeneous resources, forcing researchers to act as manual workflow coordinators rather than scientists. Advances in AI leading to AI agents show…

Artificial Intelligence · Computer Science 2025-09-15 Woong Shin , Renan Souza , Daniel Rosendo , Frédéric Suter , Feiyi Wang , Prasanna Balaprakash , Rafael Ferreira da Silva

Contemporary multi-agent systems increasingly rely on internal coordination mechanisms to combine, arbitrate, or constrain the outputs of heterogeneous components. In safety-critical and regulated domains such as finance, these mechanisms…

Multiagent Systems · Computer Science 2026-02-03 Jose Manuel de la Chica Rodriguez , Juan Manuel Vera Díaz

MCP Server Proto-OKN (mcp-proto-okn) is a Python-based Model Context Protocol server that enables AI assistants to discover, inspect, query and integrate scientific knowledge graphs through natural language. The server provides graph…

Tool calling has emerged as a critical capability for AI agents. In contrast to conventional tool calling frameworks that rely on static, provider-specific tool definitions, the Model Context Protocol (MCP) offers a unified interface to…

Computational data governance aims to make the enforcement of governance policies and legal obligations more efficient and reliable. Recent advances in natural language processing and agentic AI offer ways to improve how organizations share…

Emerging Technologies · Computer Science 2026-05-12 Marco Tonnarelli , Filippo Scaramuzza , Simon Harrer , Linus W. Dietz

The Transmission Control Protocol (TCP) relies on a state machine and deterministic arithmetic to ensure reliable connections. However, traditional protocol logic driven by hard-coded state machines struggles to meet the demands of…

Networking and Internet Architecture · Computer Science 2025-12-02 Yule Han , Kezhi Wang , Kun Yang

Bioinformatics tools are essential for complex computational biology tasks, yet their integration with emerging AI-agent frameworks is hindered by incompatible interfaces, heterogeneous input-output formats, and inconsistent parameter…

Quantitative Methods · Quantitative Biology 2025-10-03 Florensia Widjaja , Zhangtianyi Chen , Juexiao Zhou

The Model Context Protocol (MCP), introduced by Anthropic, provides a standardized framework for artificial intelligence (AI) systems to interact with external data sources and tools in real-time. While MCP offers significant advantages for…

Cryptography and Security · Computer Science 2025-05-06 Vineeth Sai Narajala , Idan Habler