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The Flow Decomposition problem, which asks for the smallest set of weighted paths that "covers" a flow on a DAG, has recently been used as an important computational step in transcript assembly. We prove the problem is in FPT when…

Data Structures and Algorithms · Computer Science 2017-08-31 Kyle Kloster , Philipp Kuinke , Michael P. O'Brien , Felix Reidl , Fernando Sánchez Villaamil , Blair D. Sullivan , Andrew van der Poel

Distributed graph signal processing algorithms require the network nodes to communicate by exchanging messages in order to achieve a common objective. These messages have a finite precision in realistic networks, which may necessitate to…

Signal Processing · Electrical Eng. & Systems 2019-09-30 Isabela Cunha Maia Nobre , Pascal Frossard

Given a graph G, a matching is a subset of edges of G that do not share an endpoint. A matching M is uniquely restricted if the subgraph induced by the endpoints of the edges of M has exactly one perfect matching. Given a graph G and a…

Data Structures and Algorithms · Computer Science 2025-08-19 Juhi Chaudhary , Ignasi Sau , Meirav Zehavi

Parameters in deep neural networks which are trained on large-scale databases can generalize across multiple domains, which is referred as "transferability". Unfortunately, the transferability is usually defined as discrete states and it…

Machine Learning · Computer Science 2018-04-25 Yinghua Zhang , Yu Zhang , Qiang Yang

This paper deals with the complexity of some natural graph problems when parametrized by {measures that are restrictions of} clique-width, such as modular-width and neighborhood diversity. The main contribution of this paper is to introduce…

Computational Complexity · Computer Science 2020-02-03 Gennaro Cordasco , Luisa Gargano , Adele Anna Rescigno

In the Disjoint Shortest Paths problem one is given a graph $G$ and a set $\mathcal{T}=\{(s_1,t_1),\dots,(s_k,t_k)\}$ of $k$ vertex pairs. The question is whether there exist vertex-disjoint paths $P_1,\dots,P_k$ in $G$ so that each $P_i$…

Data Structures and Algorithms · Computer Science 2025-05-07 Michał Pilipczuk , Giannos Stamoulis , Michał Włodarczyk

It is known that a number of natural graph problems which are FPT parameterized by treewidth become W-hard when parameterized by clique-width. It is therefore desirable to find a different structural graph parameter which is as general as…

Data Structures and Algorithms · Computer Science 2013-08-15 Jakub Gajarský , Michael Lampis , Sebastian Ordyniak

We consider a the minimum k-way cut problem for unweighted graphs with a size bound s on the number of cut edges allowed. Thus we seek to remove as few edges as possible so as to split a graph into k components, or report that this requires…

Discrete Mathematics · Computer Science 2011-01-27 Ken-ichi Kawarabayashi , Mikkel Thorup

In $d$-Scattered Set we are given an (edge-weighted) graph and are asked to select at least $k$ vertices, so that the distance between any pair is at least $d$, thus generalizing Independent Set. We provide upper and lower bounds on the…

Computational Complexity · Computer Science 2018-11-13 Ioannis Katsikarelis , Michael Lampis , Vangelis Th. Paschos

Fixed-parameter tractability analysis and scheduling are two core domains of combinatorial optimization which led to deep understanding of many important algorithmic questions. However, even though fixed-parameter algorithms are appealing…

Data Structures and Algorithms · Computer Science 2013-11-19 Matthias Mnich , Andreas Wiese

Purpose: To evaluate the performance of an automated choroid segmentation algorithm in optical coherence tomography (OCT) data using a longitudinal kidney donor and recipient cohort. Methods: We assessed 22 donors and 23 patients requiring…

Kidney transplantation is the preferred treatment for people suffering from end-stage renal disease. Successful kidney transplants still fail over time, known as graft failure; however, the time to graft failure, or graft survival time, can…

Machine Learning · Computer Science 2022-11-07 Zhipeng Huang , Kevin S. Xu

Grid graphs, and, more generally, $k\times r$ grid graphs, form one of the most basic classes of geometric graphs. Over the past few decades, a large body of works studied the (in)tractability of various computational problems on grid…

Data Structures and Algorithms · Computer Science 2021-07-01 Siddharth Gupta , Guy Sa'ar , Meirav Zehavi

The Satisfactory Partition problem consists in deciding if the set of vertices of a given undirected graph can be partitioned into two nonempty parts such that each vertex has at least as many neighbours in its part as in the other part.…

Data Structures and Algorithms · Computer Science 2020-07-29 Ajinkya Gaikwad , Soumen Maity , Shuvam Kant Tripathi

We consider the well-studied problem of finding a spanning tree with minimum average distance between vertex pairs (called a MAD tree). This is a classic network design problem which is known to be NP-hard. While approximation algorithms…

Data Structures and Algorithms · Computer Science 2026-04-01 Tom-Lukas Breitkopf , Vincent Froese , Anton Herrmann , André Nichterlein , Camille Richer

We introduce a general method for obtaining fixed-parameter algorithms for problems about finding paths in undirected graphs, where the length of the path could be unbounded in the parameter. The first application of our method is as…

Data Structures and Algorithms · Computer Science 2022-07-18 Fedor V. Fomin , Petr A. Golovach , Tuukka Korhonen , Kirill Simonov , Giannos Stamoulis

Parameterized complexity seeks to use input structure to obtain faster algorithms for NP-hard problems. This has been most successful for graphs of low treewidth: Many problems admit fast algorithms relative to treewidth and many of them…

Computational Complexity · Computer Science 2022-12-20 Falko Hegerfeld , Stefan Kratsch

The graph parameter of pathwidth can be seen as a measure of the topological resemblance of a graph to a path. A popular definition of pathwidth is given in terms of node search where we are given a system of tunnels that is contaminated by…

Data Structures and Algorithms · Computer Science 2022-09-13 Mamadou Moustapha Kanté , Christophe Paul , Dimitrios M. Thilikos

We give an algorithm that decides whether the bipartite crossing number of a given graph is at most $k$. The running time of the algorithm is upper bounded by $2^{O(k)} + n^{O(1)}$, where $n$ is the number of vertices of the input graph,…

Data Structures and Algorithms · Computer Science 2015-12-21 Yasuaki Kobayashi , Hisao Tamaki

We consider the following natural graph cut problem called Critical Node Cut (CNC): Given a graph $G$ on $n$ vertices, and two positive integers $k$ and $x$, determine whether $G$ has a set of $k$ vertices whose removal leaves $G$ with at…

Data Structures and Algorithms · Computer Science 2015-06-30 Danny Hermelin , Moshe Kaspi , Christian Komusiewicz , Barak Navon