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We consider the Bayesian calibration of models describing the phenomenon of block copolymer (BCP) self-assembly using image data produced by microscopy or X-ray scattering techniques. To account for the random long-range disorder in BCP…

Computational Physics · Physics 2022-06-24 Ricardo Baptista , Lianghao Cao , Joshua Chen , Omar Ghattas , Fengyi Li , Youssef M. Marzouk , J. Tinsley Oden

Molecular crystals respond to a light stimulus by bending, twisting, rolling, jumping, or other kinematic behaviors. These behaviors are known to be affected by, among others, the intensity of the incident light, the aspect ratios of…

Materials Science · Physics 2025-01-28 Devesh Tiwari , Ananya Renuka Balakrishna

The CryoEM single particle imaging method has recently received broad attention in the field of structural biology for determining the structures of biological molecules. The structures can be resolved to near-atomic resolutions after…

Biomolecules · Quantitative Biology 2017-12-27 Yihua Wang , Daqi Yu , Qi Ouyang , Haiguang Liu

The mechanical response of almost pure single-crystal micro-pillars under compression exhibits a highly localized behavior that can endanger the structural stability of a sample. Recent experiments revealed that the mechanical response of a…

Materials Science · Physics 2020-05-12 Oguz Umut Salman , Ioan R. Ionescu

The advent of fabrication techniques such as additive manufacturing has focused attention on the considerable variability of material response due to defects and other microstructural aspects. This variability motivates the development of…

Data Analysis, Statistics and Probability · Physics 2019-06-26 Francesco Rizzi , Mohammad Khalil , Reese E. Jones , Jeremy A. Templeton , Jakob T. Ostien , Brad L. Boyce

A mathematical model of plastic deformation in face-centered cubic (FCC) materials based on a balance model taking into account fundamental properties of deformation defects of a crystal lattice was developed. This model is based on a…

Materials Science · Physics 2013-05-07 Mikhail Semenov , Svetlana Kolupaeva

In this work we propose an Uncertainty Quantification methodology for sedimentary basins evolution under mechanical and geochemical compaction processes, which we model as a coupled, time-dependent, non-linear, monodimensional (depth-only)…

Numerical Analysis · Mathematics 2017-11-22 Ivo Colombo , Fabio Nobile , Giovanni Porta , Anna Scotti , Lorenzo Tamellini

Debye-Waller factor, a measure of X-ray attenuation, can be experimentally observed in protein X-ray crystallography. Previous theoretical models have made strong inroads in the analysis of B-factors by linearly fitting protein B-factors…

Biomolecules · Quantitative Biology 2018-10-17 David Bramer , Guo-Wei Wei

Understanding polymorph selection in atomic and molecular systems and its control through thermodynamic conditions and external factors (such as seed characteristics) is fundamental to the design of targeted materials and holds great…

Soft Condensed Matter · Physics 2025-06-18 Abhilasha Kumari , Gadha Ramesh , Debasish Koner , Rakesh S. Singh , Mantu Santra

A systematic study on the different roles of the governing components of a well-defined finite-deformation gradient crystal-plasticity model proposed by (Gurtin, 2008b) is carried out, in order to visualize the capability of the model in…

Computational Physics · Physics 2017-09-13 Habib Pouriayevali , Bai-Xiang Xu

The present paper is concerned with the development of a micromechanical model of the hardening, rate-sensitivity and thermal softening of bcc crystals. In formulating the model we specifically consider the following unit processes:…

Materials Science · Physics 2009-11-07 Laurent Stainier , Alberto M. Cuitino , Michael Ortiz

Critical quantum metrology relies on the extreme sensitivity of a system's eigenstates near the critical point of a quantum phase transition to Hamiltonian perturbations. This means that these eigenstates are extremely sensitive to all the…

Quantum Physics · Physics 2025-06-12 George Mihailescu , Steve Campbell , Karol Gietka

Conformational flexibility of molecules involved in crystal growth and dissolution is rarely investigated in detail, and usually considered to be negligible in the formulation of mesoscopic models of crystal growth. In this work we set out…

Chemical Physics · Physics 2018-07-13 Veselina Marinova , Geoffrey P. F. Wood , Ivan Marziano , Matteo Salvalaglio

Rock and ice are ubiquitous geologic materials. While apparently solid, they also exhibit fluid behavior under stress - a property termed viscoelasticity. Viscoelastic convection of Earth's mantle drives tectonic plate motion with…

Geophysics · Physics 2025-04-22 Ron Maor , Lars Hansen , Douglas Jerolmack , David Goldsby

We present a methodology for quantifying seismic velocity and pore pressure uncertainty that incorporates information regarding the geological history of a basin, rock physics, well log, drilling and seismic data. In particular, our…

Geophysics · Physics 2019-11-21 Anshuman Pradhan , Huy Q. Le , Nader C. Dutta , Biondo Biondi , Tapan Mukerji

A general nonlinear theory for the elasticity of pre-stressed single crystals is presented. Various types of elastic moduli are defined, their importance is determined, and relationships between them are presented. In particular, B moduli…

Materials Science · Physics 2022-01-05 Valery I. Levitas

The predictions of parameteric property models and their uncertainties are sensitive to systematic errors such as inconsistent reference data, parametric model assumptions, or inadequate computational methods. Here, we discuss the…

Chemical Physics · Physics 2017-08-14 Jonny Proppe , Markus Reiher

Standard methods in computer model calibration treat the calibration parameters as constant throughout the domain of control inputs. In many applications, systematic variation may cause the best values for the calibration parameters to…

Methodology · Statistics 2017-02-09 D. Andrew Brown , Sez Atamturktur

The reliability of the mercury spallation target is mission-critical for the neutron science program of the spallation neutron source at the Oak Ridge National Laboratory. We present an inverse uncertainty quantification (UQ) study using…

Accelerator Physics · Physics 2022-07-07 Majdi I. Radaideh , Lianshan Lin , Hao Jiang , Sarah Cousineau

While deep neural networks have become the go-to approach in computer vision, the vast majority of these models fail to properly capture the uncertainty inherent in their predictions. Estimating this predictive uncertainty can be crucial,…

Machine Learning · Computer Science 2020-04-08 Fredrik K. Gustafsson , Martin Danelljan , Thomas B. Schön