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Vertebral bone segmentation from magnetic resonance (MR) images is a challenging task. Due to the inherent nature of the modality to emphasize soft tissues of the body, common thresholding algorithms are ineffective in detecting bones in MR…

Image and Video Processing · Electrical Eng. & Systems 2021-03-02 Enamundram M. V. Naga Karthik , Catherine Laporte , Farida Cheriet

One of the most important tasks in medical image processing is the brain's whole tumor segmentation. It assists in quicker clinical assessment and early detection of brain tumors, which is crucial for lifesaving treatment procedures of…

Computer Vision and Pattern Recognition · Computer Science 2020-09-15 Apurva Pandya , Catherine Samuel , Nisargkumar Patel , Vaibhavkumar Patel , Thangarajah Akilan

Brain tumors pose a significant global health challenge due to their high prevalence and mortality rates across all age groups. Detecting brain tumors at an early stage is crucial for effective treatment and patient outcomes. This study…

Image and Video Processing · Electrical Eng. & Systems 2023-10-30 Jonayet Miah , Duc M Cao , Md Abu Sayed3 , Md Siam Taluckder , Md Sabbirul Haque , Fuad Mahmud

Accurate segmentation of brain tissue in magnetic resonance images (MRI) is a diffcult task due to different types of brain abnormalities. Using information and features from multimodal MRI including T1, T1-weighted inversion recovery…

Computer Vision and Pattern Recognition · Computer Science 2019-03-07 Yongpei Zhu , Zicong Zhou , Guojun Liao , Qianxi Yang , Kehong Yuan

Accurate assessment of spheno-occipital synchondrosis (SOS) maturation is a key indicator of craniofacial growth and a critical determinant for orthodontic and surgical timing. However, SOS staging from cone-beam CT (CBCT) relies on subtle,…

Computer Vision and Pattern Recognition · Computer Science 2026-04-14 Omid Halimi Milani , Amanda Nikho , Marouane Tliba , Lauren Mills , Emadeldeen Hamdan , Ahmet Enis Cetin , Mohammed H. Elnagar

Background: In MR-guided proton therapy planning, aligning MR and CT images is key for MR-based CT synthesis, especially in mobile regions like the head-and-neck. Misalignments here can lead to less accurate synthetic CT (sCT) images,…

We consider a missing data problem in the context of automatic segmentation methods for Magnetic Resonance Imaging (MRI) brain scans. Usually, automated MRI scan segmentation is based on multiple scans (e.g., T1-weighted, T2-weighted, T1CE,…

Image and Video Processing · Electrical Eng. & Systems 2024-05-06 Giulia Baldini , Melanie Schmidt , Charlotte Zäske , Liliana L. Caldeira

Accurate segmentation of infant brain MRI is essential for quantifying developmental changes in structure and complexity. However, ongoing myelination and reduced tissue contrast make automated segmentation particularly challenging. This…

Computer Vision and Pattern Recognition · Computer Science 2025-12-16 Nathalie Alexander , Arnaud Gucciardi , Umberto Michelucci

Accurate and reproducible brain morphometry from structural MRI is critical for monitoring neuroanatomical changes across time and across imaging domains. Although deep learning has accelerated segmentation workflows, scanner-induced…

Computer Vision and Pattern Recognition · Computer Science 2025-04-23 Ekaterina Kondrateva , Sandzhi Barg , Mikhail Vasiliev

Understanding individual differences in cortical structure is key to advancing diagnostics in neurology and psychiatry. Reference models aid in detecting aberrant cortical thickness, yet site-specific biases limit their direct application…

Computer Vision and Pattern Recognition · Computer Science 2025-09-24 Christian Wachinger , Dennis Hedderich , Melissa Thalhammer , Fabian Bongratz

Whole brain segmentation on structural magnetic resonance imaging (MRI) is essential for understanding neuroanatomical-functional relationships. Traditionally, multi-atlas segmentation has been regarded as the standard method for whole…

Computer Vision and Pattern Recognition · Computer Science 2019-01-09 Yunxi Xiong , Yuankai Huo , Jiachen Wang , L. Taylor Davis , Maureen McHugo , Bennett A. Landman

Morphological and diagnostic evaluation of pediatric musculoskeletal system is crucial in clinical practice. However, most segmentation models do not perform well on scarce pediatric imaging data. We propose a new pre-trained regularized…

Image and Video Processing · Electrical Eng. & Systems 2022-07-21 Arnaud Boutillon , Bhushan Borotikar , Valérie Burdin , Pierre-Henri Conze

Fetal brain magnetic resonance imaging serves as an emerging modality for prenatal counseling and diagnosis in disorders affecting the brain. Machine learning based segmentation plays an important role in the quantification of brain…

Image and Video Processing · Electrical Eng. & Systems 2022-09-21 Marina Fernandez Garcia , Rodrigo Gonzalez Laiz , Hui Ji , Kelly Payette , Andras Jakab

Surgical planning for complex tibial fractures can be challenging for surgeons, as the 3D structure of the later desirable bone alignment may be difficult to imagine. To assist in such planning, we address the challenge of predicting a…

Computer Vision and Pattern Recognition · Computer Science 2025-12-19 Hongyou Zhou , Cederic Aßmann , Alaa Bejaoui , Heiko Tzschätzsch , Mark Heyland , Julian Zierke , Niklas Tuttle , Sebastian Hölzl , Timo Auer , David A. Back , Marc Toussaint

Autism spectrum disorder (ASD) is a highly disabling mental disease that brings significant impairments of social interaction ability to the patients, making early screening and intervention of ASD critical. With the development of the…

Computer Vision and Pattern Recognition · Computer Science 2025-04-08 Ruimin Ma , Ruitao Xie , Yanlin Wang , Jintao Meng , Yanjie Wei , Wenhui Xi , Yi Pan

Characterizing in-utero brain development is essential for understanding typical and atypical neurodevelopment. Building on prior spatiotemporal fetal brain MRI atlases, we present the CRL-2025 fetal brain atlas, a spatiotemporal (4D) atlas…

Tumor segmentation in multimodal medical images has seen a growing trend towards deep learning based methods. Typically, studies dealing with this topic fuse multimodal image data to improve the tumor segmentation contour for a single…

Image and Video Processing · Electrical Eng. & Systems 2020-09-25 Theresa Neubauer , Maria Wimmer , Astrid Berg , David Major , Dimitrios Lenis , Thomas Beyer , Jelena Saponjski , Katja Bühler

The deployment of artificial intelligence in medical imaging is hindered by high computational complexity and resource-intensive processing of volumetric data. Although chest computed tomography (CT) volumes offer richer diagnostic…

Computer Vision and Pattern Recognition · Computer Science 2026-05-04 Shadid Yousuf , S. M. Mahbubur Rahman , Mohammed Imamul Hassan Bhuiyan

Early and accurate assessment of brain microstructure using diffusion Magnetic Resonance Imaging (dMRI) is crucial for identifying neurodevelopmental disorders in neonates, but remains challenging due to low signal-to-noise ratio (SNR),…

Computer Vision and Pattern Recognition · Computer Science 2025-10-15 Haykel Snoussi , Davood Karimi

Automatic segmentation in MR brain images is important for quantitative analysis in large-scale studies with images acquired at all ages. This paper presents a method for the automatic segmentation of MR brain images into a number of tissue…

Computer Vision and Pattern Recognition · Computer Science 2017-04-12 Pim Moeskops , Max A. Viergever , Adriënne M. Mendrik , Linda S. de Vries , Manon J. N. L. Benders , Ivana Išgum