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Integrating functional magnetic resonance imaging (fMRI) connectivity data with phenotypic textual descriptors (e.g., disease label, demographic data) holds significant potential to advance our understanding of neurological conditions.…
The broad adoption of Electronic Health Records (EHR) has led to vast amounts of data being accumulated on a patient's history, diagnosis, prescriptions, and lab tests. Advances in recommender technologies have the potential to utilize this…
Operating rooms (ORs) demand precise coordination among surgeons, nurses, and equipment in a fast-paced, occlusion-heavy environment, necessitating advanced perception models to enhance safety and efficiency. Existing datasets either…
Objective:Develop and validate an algorithm for analyzing the layout of PDF clinical documents to improve the performance of downstream natural language processing tasks. Materials and Methods: We designed an algorithm to process clinical…
Information retrieval (IR) for precision medicine (PM) often involves looking for multiple pieces of evidence that characterize a patient case. This typically includes at least the name of a condition and a genetic variation that applies to…
The detection of sequential patterns in data is a basic functionality of modern data processing systems for complex event processing (CEP), OLAP, and retrieval-augmented generation (RAG). In practice, pattern matching is challenging, since…
Fine-grained ship instance segmentation in satellite images holds considerable significance for monitoring maritime activities at sea. However, existing datasets often suffer from the scarcity of fine-grained information or pixel-wise…
Document parsing from scanned images into structured formats remains a significant challenge due to its complexly intertwined elements such as text paragraphs, figures, formulas, and tables. Existing supervised fine-tuning methods often…
Many earth science applications require data at both high spatial and temporal resolution for effective monitoring of various ecosystem resources. Due to practical limitations in sensor design, there is often a trade-off in different…
Automated fact-checking aims to assess the truthfulness of textual claims based on relevant evidence. However, verifying complex claims that require multi-hop reasoning remains a significant challenge. We propose GraphCheck, a novel…
Text-guided medical segmentation enhances segmentation accuracy by utilizing clinical reports as auxiliary information. However, existing methods typically rely on unaligned image and text encoders, which necessitate complex interaction…
Learning image representations to capture fine-grained semantics has been a challenging and important task enabling many applications such as image search and clustering. In this paper, we present Graph-Regularized Image Semantic Embedding…
Contrastive Language-Image Pre-training (CLIP) has demonstrated remarkable generalization ability and strong performance across a wide range of vision-language tasks. However, due to the lack of region-level supervision, CLIP exhibits…
Understanding disease similarity is critical for advancing diagnostics, drug discovery, and personalized treatment strategies. We present PhenoGnet, a novel graph-based contrastive learning framework designed to predict disease similarity…
Clinical trials play important roles in drug development but often suffer from expensive, inaccurate and insufficient patient recruitment. The availability of massive electronic health records (EHR) data and trial eligibility criteria (EC)…
Medical activities, such as diagnoses, medicine treatments, and laboratory tests, as well as temporal relations between these activities are the basic concepts in clinical research. However, existing relational data model on electronic…
Comprehensive evaluation is one of the basis of experimental science. In High-Performance Graph Processing, a thorough evaluation of contributions becomes more achievable by supporting common input formats over different frameworks.…
Chinese scene text retrieval is a practical task that aims to search for images containing visual instances of a Chinese query text. This task is extremely challenging because Chinese text often features complex and diverse layouts in…
Referring medical image segmentation targets delineating lesions indicated by textual descriptions. Aligning visual and textual cues is challenging due to their distinct data properties. Inspired by large-scale pre-trained vision-language…
The Biomedical Entity Normalization (BEN) task aims to align raw, unstructured medical entities to standard entities, thus promoting data coherence and facilitating better downstream medical applications. Recently, prompt learning methods…