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Human anatomy is the foundation of medical imaging and boasts one striking characteristic: its hierarchy in nature, exhibiting two intrinsic properties: (1) locality: each anatomical structure is morphologically distinct from the others;…

Computer Vision and Pattern Recognition · Computer Science 2023-09-28 Mohammad Reza Hosseinzadeh Taher , Michael B. Gotway , Jianming Liang

Supervised learning method requires a large volume of annotated datasets. Collecting such datasets is time-consuming and expensive. Until now, very few annotated COVID-19 imaging datasets are available. Although self-supervised learning…

Image and Video Processing · Electrical Eng. & Systems 2020-12-14 Li Sun , Ke Yu , Kayhan Batmanghelich

Although self-supervised learning enables us to bootstrap the training by exploiting unlabeled data, the generic self-supervised methods for natural images do not sufficiently incorporate the context. For medical images, a desirable method…

Image and Video Processing · Electrical Eng. & Systems 2022-07-08 Li Sun , Ke Yu , Kayhan Batmanghelich

Foundation models have transformed vision and language by learning general-purpose representations from large-scale unlabeled data, yet 3D medical imaging lacks analogous approaches. Existing self-supervised methods rely on low-level…

Computer Vision and Pattern Recognition · Computer Science 2026-03-17 Yunhe Gao , Yabin Zhang , Chong Wang , Jiaming Liu , Maya Varma , Jean-Benoit Delbrouck , Akshay Chaudhari , Curtis Langlotz

This paper demonstrates that spatial information can be used to learn interpretable representations in medical images using Self-Supervised Learning (SSL). Our proposed method, ISImed, is based on the observation that medical images exhibit…

Computer Vision and Pattern Recognition · Computer Science 2024-10-23 Nabil Jabareen , Dongsheng Yuan , Sören Lukassen

Graph neural networks (GNNs) work well when the graph structure is provided. However, this structure may not always be available in real-world applications. One solution to this problem is to infer a task-specific latent structure and then…

Machine Learning · Computer Science 2021-11-02 Bahare Fatemi , Layla El Asri , Seyed Mehran Kazemi

Self-supervised pre-training paradigm has gained increasing prominence for learning transferable representations in medical imaging, yet existing methods for ultrasound (US) images operate at the image or frame level, overlooking the…

Computer Vision and Pattern Recognition · Computer Science 2026-05-26 Chunzheng Zhu , Yijun Wang , Jianxin Lin , Feng Wang , Hongwei Wang , Lei Zhao , Shengli Li , Kenli Li

Self-supervised learning (SSL) has emerged as a promising paradigm for addressing the annotation bottleneck in medical imaging by learning representations from unlabeled data. However, its effectiveness depends heavily on the design of the…

Computer Vision and Pattern Recognition · Computer Science 2026-05-26 Chathura Wimalasiri

Radiological images such as computed tomography (CT) and X-rays render anatomy with intrinsic structures. Being able to reliably locate the same anatomical structure across varying images is a fundamental task in medical image analysis. In…

Computer Vision and Pattern Recognition · Computer Science 2023-10-24 Ke Yan , Jinzheng Cai , Dakai Jin , Shun Miao , Dazhou Guo , Adam P. Harrison , Youbao Tang , Jing Xiao , Jingjing Lu , Le Lu

Self-supervised learning (SSL) has recently achieved promising performance for 3D medical image analysis tasks. Most current methods follow existing SSL paradigm originally designed for photographic or natural images, which cannot…

Computer Vision and Pattern Recognition · Computer Science 2023-08-21 Yankai Jiang , Mingze Sun , Heng Guo , Xiaoyu Bai , Ke Yan , Le Lu , Minfeng Xu

Humans effortlessly interpret images by parsing them into part-whole hierarchies; deep learning excels in learning multi-level feature spaces, but they often lack explicit coding of part-whole relations, a prominent property of medical…

Computer Vision and Pattern Recognition · Computer Science 2024-04-25 Mohammad Reza Hosseinzadeh Taher , Michael B. Gotway , Jianming Liang

Foundation models (FMs) are changing the way medical images are analyzed by learning from large collections of unlabeled data. Instead of relying on manually annotated examples, FMs are pre-trained to learn general-purpose visual features…

Self-supervised learning techniques are celebrating immense success in natural language processing (NLP) by enabling models to learn from broad language data at unprecedented scales. Here, we aim to leverage the success of these techniques…

Neurons and Cognition · Quantitative Biology 2023-01-18 Armin W. Thomas , Christopher Ré , Russell A. Poldrack

Modern neural language models (LMs) are powerful tools for modeling human sentence production and comprehension, and their internal representations are remarkably well-aligned with representations of language in the human brain. But to…

Computation and Language · Computer Science 2024-03-27 Chengxu Zhuang , Evelina Fedorenko , Jacob Andreas

Deep learning architectures based on convolutional neural networks tend to rely on continuous, smooth features. While this characteristics provides significant robustness and proves useful in many real-world tasks, it is strikingly…

Computer Vision and Pattern Recognition · Computer Science 2026-03-10 Zuzanna Buchnajzer , Kacper Dobek , Stanisław Hapke , Daniel Jankowski , Krzysztof Krawiec

Recent work has shown that label-efficient few-shot learning through self-supervision can achieve promising medical image segmentation results. However, few-shot segmentation models typically rely on prototype representations of the…

Image and Video Processing · Electrical Eng. & Systems 2022-03-07 Stine Hansen , Srishti Gautam , Robert Jenssen , Michael Kampffmeyer

Self-supervised pre-training methods in medical imaging typically treat each individual as an isolated instance, learning representations through augmentation-based objectives or masked reconstruction. They often do not adequately…

Computer Vision and Pattern Recognition · Computer Science 2026-05-15 Tan Pan , Shuhao Mei , Yixuan Sun , Kaiyu Guo , Chen Jiang , Zhaorui Tan , Mengzhu Li , Limei Han , Xiang Zou , Yuan Cheng , Mahsa Baktashmotlagh

Self-supervised learning has emerged as a powerful tool for pretraining deep networks on unlabeled data, prior to transfer learning of target tasks with limited annotation. The relevance between the pretraining pretext and target tasks is…

Computer Vision and Pattern Recognition · Computer Science 2024-04-09 Tianwei Zhang , Dong Wei , Mengmeng Zhu , Shi Gu , Yefeng Zheng

Self-supervised learning (SSL) approaches have recently shown substantial success in learning visual representations from unannotated images. Compared with photographic images, medical images acquired with the same imaging protocol exhibit…

Computer Vision and Pattern Recognition · Computer Science 2024-06-12 Ziyu Zhou , Haozhe Luo , Jiaxuan Pang , Xiaowei Ding , Michael Gotway , Jianming Liang

The field of medical diagnostics contains a wealth of challenges which closely resemble classical machine learning problems; practical constraints, however, complicate the translation of these endpoints naively into classical architectures.…

Computer Vision and Pattern Recognition · Computer Science 2018-02-05 Li Yao , Eric Poblenz , Dmitry Dagunts , Ben Covington , Devon Bernard , Kevin Lyman
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