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Link prediction is an important learning task for graph-structured data. In this paper, we propose a novel topological approach to characterize interactions between two nodes. Our topological feature, based on the extended persistent…

Machine Learning · Computer Science 2021-06-15 Zuoyu Yan , Tengfei Ma , Liangcai Gao , Zhi Tang , Chao Chen

Graph Neural Networks (GNNs) are powerful to learn the representation of graph-structured data. Most of the GNNs use the message-passing scheme, where the embedding of a node is iteratively updated by aggregating the information of its…

Machine Learning · Computer Science 2020-07-28 Shuo Zhang , Lei Xie

Recent years have witnessed a fast growth in mathematical artificial intelligence (AI). One of the most successful mathematical AI approaches is topological data analysis (TDA) via persistent homology (PH) that provides explainable AI (xAI)…

General Topology · Mathematics 2025-10-27 Yiming Ren , Guowei Wei

The field of mathematical morphology offers well-studied techniques for image processing. In this work, we view morphological operations through the lens of persistent homology, a tool at the heart of the field of topological data analysis.…

Computational Geometry · Computer Science 2021-03-25 Yu-Min Chung , Sarah Day , Chuan-Shen Hu

Graph parameters such as the clique number, the chromatic number, and the independence number are central in many areas, ranging from computer networks to linguistics to computational neuroscience to social networks. In particular, the…

Computational Complexity · Computer Science 2020-12-15 Fabian Frei , Edith Hemaspaandra , Jörg Rothe

Persistent homology is a popular tool in Topological Data Analysis. It provides numerical characteristics of data sets which reflect global geometric properties. In order to be useful in practice, for example for feature generation in…

Computational Geometry · Computer Science 2020-02-17 Boris Goldfarb

We introduce a variant of (sparse) PCA in which the set of feasible support sets is determined by a graph. In particular, we consider the following setting: given a directed acyclic graph $G$ on $p$ vertices corresponding to variables, the…

Cohomological ideas have recently been injected into persistent homology and have for example been used for accelerating the calculation of persistence diagrams by the software Ripser. The cup product operation which is available at…

Algebraic Topology · Mathematics 2022-12-20 Marco Contessoto , Facundo Mémoli , Anastasios Stefanou , Ling Zhou

We propose graph canonical coherence analysis (gCChA), a novel framework that extends canonical correlation analysis to multivariate graph signals in the graph frequency domain. The proposed method addresses challenges posed by the inherent…

Methodology · Statistics 2026-01-15 Kyusoon Kim , Hee-Seok Oh

In this article we describe a new inductive approach to compute the chromatic polynomial of simple graphs and the characteristic polynomial of central hyperplane arrangements.

Combinatorics · Mathematics 2026-05-26 Madison Cox , Michele Torielli

In many CAD-based applications, complex geometries are defined by a high number of design parameters. This leads to high-dimensional design spaces that are challenging for downstream engineering processes like simulations, optimization, and…

Machine Learning · Computer Science 2026-03-24 Alexander Köhler , Michael Breuß

Persistent homology is a method for computing the topological features present in a given data. Recently, there has been much interest in the integration of persistent homology as a computational step in neural networks or deep learning. In…

Machine Learning · Computer Science 2020-11-17 Padraig Corcoran , Bailin Deng

In topological data analysis, persistent homology is used to study the "shape of data". Persistent homology computations are completely characterized by a set of intervals called a bar code. It is often said that the long intervals…

Computational Geometry · Computer Science 2025-02-19 Peter Bubenik , Michael Hull , Dhruv Patel , Benjamin Whittle

Graph homomorphism has been studied intensively. Given an m x m symmetric matrix A, the graph homomorphism function is defined as \[Z_A (G) = \sum_{f:V->[m]} \prod_{(u,v)\in E} A_{f(u),f(v)}, \] where G = (V,E) is any undirected graph. The…

Computational Complexity · Computer Science 2011-10-10 Jin-Yi Cai , Xi Chen , Pinyan Lu

Many datasets can be viewed as a noisy sampling of an underlying space, and tools from topological data analysis can characterize this structure for the purpose of knowledge discovery. One such tool is persistent homology, which provides a…

Conformal prediction provides rigorous distribution-free finite-sample guarantees for marginal coverage under the assumption of exchangeability, but may exhibit systematic undercoverage or overcoverage for specific subpopulations. Assessing…

Methodology · Statistics 2026-04-24 Zheng Zhou , Xiangfei Zhang , Chongguang Tao , Yuhong Yang

Persistent Homology (PH) is a fundamental tool in computational topology, designed to uncover the intrinsic geometric and topological features of data across multiple scales. Originating within the broader framework of Topological Data…

Algebraic Topology · Mathematics 2025-05-13 Aurelie Jodelle Kemme , Collins Amburo Agyingi

In this paper, we propose Continuous Graph Flow, a generative continuous flow based method that aims to model complex distributions of graph-structured data. Once learned, the model can be applied to an arbitrary graph, defining a…

Machine Learning · Computer Science 2019-10-01 Zhiwei Deng , Megha Nawhal , Lili Meng , Greg Mori

Persistent homology is a cornerstone of topological data analysis, offering a multiscale summary of topology with robustness to nuisance transformations, such as rotations and small deformations. Persistent homology has seen broad use…

Methodology · Statistics 2025-11-19 Zitian Wu , Arkaprava Roy , Leo L. Duan

In graph theory, Graph Colouring Problem (GCP) is an assignment of colours to vertices of any given graph such that the colours on adjacent vertices are different. The GCP is known to be an optimization and NP-hard problem. Imperialist…

Artificial Intelligence · Computer Science 2013-08-20 Hojjat Emami , Shahriar Lotfi