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MicroRNAs (miRNAs) are a class of non-coding RNAs that regulate gene expression. Identification of total number of miRNAs even in completely sequenced organisms is still an open problem. However, researchers have been using techniques that…

Computational Engineering, Finance, and Science · Computer Science 2012-05-24 A. K. Mishra , H. Chandrasekharan

Robot perception is far from what humans are capable of. Humans do not only have a complex semantic scene understanding but also extract fine-grained intra-object properties for the salient ones. When humans look at plants, they naturally…

Robotics · Computer Science 2023-12-15 Ronja Güldenring , Rasmus Eckholdt Andersen , Lazaros Nalpantidis

We study a matrix model of RNA in which an external perturbation acts on n nucleotides of the polymer chain. The effect of the perturbation appears in the exponential generating function of the partition function as a factor…

Biomolecules · Quantitative Biology 2015-05-13 I. Garg , N. Deo

We show that every orthogonal polyhedron of genus at most 2 can be unfolded without overlap while using only a linear number of orthogonal cuts (parallel to the polyhedron edges). This is the first result on unfolding general orthogonal…

Computational Geometry · Computer Science 2016-11-02 Mirela Damian , Erik Demaine , Robin Flatland , Joseph O'Rourke

Nowadays, evidence is mounting that the race of living organisms for adaptation to the chemicals synthesized by their neighbours may drive community structures. Particularly, some bacterial infections and plant invasions disruptive of the…

Populations and Evolution · Quantitative Biology 2020-10-14 Sylvestre Aureliano Carvalho , Marcelo Lobato Martins

Plant diseases often cause serious yield losses in agriculture. A pathogen's reproductive fitness can be quantified by the basic reproductive number, R0. Since pathogen transmission between host plants depends on the spatial separation…

Populations and Evolution · Quantitative Biology 2014-10-03 Alexey Mikaberidze , Christopher C. Mundt , Sebastian Bonhoeffer

Plasmodium vivax populations are more resistant to malaria control strategies than Plasmodium falciparum, maintaining high genetic diversity and gene flow even at low transmission. To quantify the impact of declining transmission on P.…

Earth's deciduous plants have a sharp order-of-magnitude increase in leaf reflectance between approximately 700 and 750 nm wavelength. This strong reflectance of Earth's vegetation suggests that surface biosignatures with sharp spectral…

Astrophysics · Physics 2007-05-23 Sara Seager , Edwin L. Turner , Justin Schafer , Eric B. Ford

In the prospect of ecology and biology, studying insect-plant predation will considerably contribute to pest control, benefit agriculture and afforestation, and also help people to better understand insect-plant co-evolution. Therefore, we…

Computational Engineering, Finance, and Science · Computer Science 2019-12-12 Fan Yang , Takatomi Kubo , Kazushi Ikeda

The agricultural sector plays an essential role in the economic growth of a country. Specifically, in an Indian context, it is the critical source of livelihood for millions of people living in rural areas. Plant Disease is one of the…

Computer Vision and Pattern Recognition · Computer Science 2024-04-29 Saurav Sagar , Mohammed Javed , David S Doermann

The diversity of the arthropod fauna from the pacific coast in southern Mexico was investigated in order to study and compare the biodiversity of two different regions. One is located within the Biosphere reserve "La encrucijada" and the…

Populations and Evolution · Quantitative Biology 2014-05-02 Solórzano Kraemer Mónica Morayma , Kraemer Atahualpa S. , Stebner Frauke

Understanding multivariate dependencies in both the bulk and the tails of a distribution is an important problem for many applications, such as ensuring algorithms are robust to observations that are infrequent but have devastating effects.…

Methodology · Statistics 2022-09-21 Yuting Ng , Ali Hasan , Vahid Tarokh

Identification of plant disease is usually done through visual inspection or during laboratory examination which causes delays resulting in yield loss by the time identification is complete. On the other hand, complex deep learning models…

Computer Vision and Pattern Recognition · Computer Science 2021-02-10 Nisar Ahmed , Hafiz Muhammad Shahzad Asif , Gulshan Saleem

The widespread presence of antibiotic resistance and virulence among Staphylococcus isolates has been attributed to lateral genetic transfer (LGT) between different strains or species. However, there has been very little study of the extent…

Genomics · Quantitative Biology 2008-01-29 Cheong Xin Chan , Robert G. Beiko , Mark A. Ragan

This paper presents AlphaGarden: an autonomous polyculture garden that prunes and irrigates living plants in a 1.5m x 3.0m physical testbed. AlphaGarden uses an overhead camera and sensors to track the plant distribution and soil moisture.…

Plants emission of volatile organic compounds (VOCs) is involved in a wide class of ecological functions, as VOCs play a crucial role in plants interactions with biotic and abiotic factors. Accordingly, they vary widely across species and…

Quantitative Methods · Quantitative Biology 2017-04-27 Gianna Vivaldo , Elisa Masi , Cosimo Taiti , Guido Caldarelli , Stefano Mancuso

Of all complex fluids, it is probably the rheology of polymers we understand best. In-depth insight into the entanglement and reptation of individual polymers allows us to predict for instance the shear-thinning rheology and the behaviour…

Soft Condensed Matter · Physics 2020-05-13 Antoine Deblais , Sander Woutersen , Daniel Bonn

When conducting inter-species regression analyses, the phylogenetic relationships between the individual species need to be taken into account. In this paper, a procedure for conducting such analyses is proposed, which only requires the use…

Populations and Evolution · Quantitative Biology 2007-05-23 Brigitte Pallmann , A. D. Barbour , D. J. Hosken , P. I. Ward

During the last two decades, ecological speciation has been a major research theme in evolutionary biology. Ecological speciation occurs when reproductive isolation between populations evolves as a result of niche differentiation.…

Populations and Evolution · Quantitative Biology 2019-10-24 Emmanuelle Jousselin , Marianne Elias

This letter investigates the multiple routes transmitted epidemic process on multiplex networks. We propose detailed theoretical analysis that allows us to accurately calculate the epidemic threshold and outbreak size. It is found that the…

Social and Information Networks · Computer Science 2015-06-18 Dawei Zhao , Lixiang Li , Haipeng Peng , Qun Luo , Yixian Yang