English
Related papers

Related papers: brat: Aligned Multi-View Embeddings for Brain MRI …

200 papers

Ultra-high resolution 7 tesla (7T) magnetic resonance imaging (MRI) provides detailed anatomical views, offering better signal-to-noise ratio, resolution and tissue contrast than 3T MRI, though at the cost of accessibility. We present an…

Lesion detection in brain Magnetic Resonance Images (MRI) remains a challenging task. State-of-the-art approaches are mostly based on supervised learning making use of large annotated datasets. Human beings, on the other hand, even…

Computer Vision and Pattern Recognition · Computer Science 2018-06-14 Xiaoran Chen , Ender Konukoglu

Multi-modal Magnetic Resonance Imaging (MRI) translation leverages information from source MRI sequences to generate target modalities, enabling comprehensive diagnosis while overcoming the limitations of acquiring all sequences. While…

Image and Video Processing · Electrical Eng. & Systems 2025-05-20 Jiyao Liu , Shangqi Gao , Yuxin Li , Lihao Liu , Xin Gao , Zhaohu Xing , Junzhi Ning , Yanzhou Su , Xiao-Yong Zhang , Junjun He , Ningsheng Xu , Xiahai Zhuang

Finding an appropriate representation of dynamic activities in the brain is crucial for many downstream applications. Due to its highly dynamic nature, temporally averaged fMRI (functional magnetic resonance imaging) can only provide a…

Machine Learning · Computer Science 2022-08-18 Sikun Lin , Shuyun Tang , Scott Grafton , Ambuj Singh

Whole-brain parcellation from MRI is a critical yet challenging task due to the complexity of subdividing the brain into numerous small, irregular shaped regions. Traditionally, template-registration methods were used, but recent advances…

Computer Vision and Pattern Recognition · Computer Science 2026-01-15 Yucheng Li , Xiaofan Wang , Junyi Wang , Yijie Li , Xi Zhu , Mubai Du , Dian Sheng , Wei Zhang , Fan Zhang

The performance of deep neural networks typically increases with the number of training images. However, not all images have the same importance towards improved performance and robustness. In fetal brain MRI, abnormalities exacerbate the…

Multi-site MRI studies often suffer from site-specific variations arising from differences in methodology, hardware, and acquisition protocols, thereby compromising accuracy and reliability in clinical AI/ML tasks. We present PRISM…

Image and Video Processing · Electrical Eng. & Systems 2024-11-12 Sarang Galada , Tanurima Halder , Kunal Deo , Ram P Krish , Kshitij Jadhav

Purpose: AI in radiology is hindered chiefly by: 1) Requiring large annotated data sets. 2) Non-generalizability that limits deployment to new scanners / institutions. And 3) Inadequate explainability and interpretability. We believe that…

Artificial Intelligence · Computer Science 2020-08-07 Joseph Stember , Hrithwik Shalu

We propose an unsupervised deep learning method for atlas based registration to achieve segmentation and spatial alignment of the embryonic brain in a single framework. Our approach consists of two sequential networks with a specifically…

Image and Video Processing · Electrical Eng. & Systems 2020-05-14 Wietske A. P. Bastiaansen , Melek Rousian , Régine P. M. Steegers-Theunissen , Wiro J. Niessen , Anton Koning , Stefan Klein

Brain morphometry from magnetic resonance imaging (MRI) is a consolidated biomarker for many neurodegenerative diseases. Recent advances in this domain indicate that deep convolutional neural networks can infer morphometric measurements…

Image and Video Processing · Electrical Eng. & Systems 2020-09-09 Rodrigo Santa Cruz , Léo Lebrat , Pierrick Bourgeat , Vincent Doré , Jason Dowling , Jurgen Fripp , Clinton Fookes , Olivier Salvado

Recent studies have shown that multi-modeling methods can provide new insights into the analysis of brain components that are not possible when each modality is acquired separately. The joint representations of different modalities is a…

Neurons and Cognition · Quantitative Biology 2022-01-24 Jalal Mirakhorli

This paper presents a novel approach towards creating a foundational model for aligning neural data and visual stimuli across multimodal representationsof brain activity by leveraging contrastive learning. We used electroencephalography…

Computer Vision and Pattern Recognition · Computer Science 2024-11-18 Matteo Ferrante , Tommaso Boccato , Grigorii Rashkov , Nicola Toschi

Quantitative magnetic resonance imaging (qMRI) offers tissue-specific physical parameters with significant potential for neuroscience research and clinical practice. However, lengthy scan times for 3D multiparametric qMRI acquisition limit…

Computer Vision and Pattern Recognition · Computer Science 2024-10-03 Guoyan Lao , Ruimin Feng , Haikun Qi , Zhenfeng Lv , Qiangqiang Liu , Chunlei Liu , Yuyao Zhang , Hongjiang Wei

Artificial and biological systems may evolve similar computational solutions despite fundamental differences in architecture and learning mechanisms -- a form of convergent evolution. We demonstrate this phenomenon through large-scale…

Neurons and Cognition · Quantitative Biology 2025-07-04 Guobin Shen , Dongcheng Zhao , Yiting Dong , Qian Zhang , Yi Zeng

Understanding the hidden mechanisms behind human's visual perception is a fundamental question in neuroscience. To that end, investigating into the neural responses of human mind activities, such as functional Magnetic Resonance Imaging…

Computer Vision and Pattern Recognition · Computer Science 2025-11-18 Yuankun Yang , Li Zhang , Ziyang Xie , Zhiyuan Yuan , Jianfeng Feng , Xiatian Zhu , Yu-Gang Jiang

Deep learning-based models in medical imaging often struggle to generalize effectively to new scans due to data heterogeneity arising from differences in hardware, acquisition parameters, population, and artifacts. This limitation presents…

Image and Video Processing · Electrical Eng. & Systems 2023-08-09 Sebastian Nørgaard Llambias , Mads Nielsen , Mostafa Mehdipour Ghazi

In image classification, it is often expensive and time-consuming to acquire sufficient labels. To solve this problem, domain adaptation often provides an attractive option given a large amount of labeled data from a similar nature but…

Computer Vision and Pattern Recognition · Computer Science 2022-01-05 Yongchun Zhu , Fuzhen Zhuang , Jindong Wang , Jingwu Chen , Zhiping Shi , Wenjuan Wu , Qing He

Radiological analysis increasingly benefits from pretrained visual representations that can support heterogeneous downstream tasks across imaging modalities. In this work, we introduce OmniRad, a self-supervised radiological foundation…

Computer Vision and Pattern Recognition · Computer Science 2026-02-05 Luca Zedda , Andrea Loddo , Cecilia Di Ruberto

Multi-sequence Magnetic Resonance Imaging (MRI) offers remarkable versatility, enabling the distinct visualization of different tissue types. Nevertheless, the inherent heterogeneity among MRI sequences poses significant challenges to the…

Identifying brain hemorrhages from magnetic resonance imaging (MRI) is a critical task for healthcare professionals. The diverse nature of MRI acquisitions with varying contrasts and orientation introduce complexity in identifying…

Image and Video Processing · Electrical Eng. & Systems 2026-05-12 Badhan Kumar Das , Gengyan Zhao , Boris Mailhe , Thomas J. Re , Dorin Comaniciu , Eli Gibson , Andreas Maier