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The complexity of gene regulatory networks in multicellular organisms makes interpretable low-dimensional models highly desirable. An attractive geometric picture, attributed to Waddington, visualizes the differentiation of a cell into…

Biological Physics · Physics 2024-12-12 Gautam Reddy

We study cascades under the threshold model on sparse random graphs with community structure. In this model, individuals adopt the new behavior based on how many neighbors have already chosen it. Specifically, we consider the permanent…

Probability · Mathematics 2022-05-05 Mehrdad Moharrami , Vijay Subramanian , Mingyan Liu , Marc Lelarge

Energy harvesting from the surroundings is a promising solution to perpetually power-up wireless sensor communications. This paper presents a data-driven approach of finding optimal transmission policies for a solar-powered sensor node that…

Networking and Internet Architecture · Computer Science 2014-05-29 Meng-Lin Ku , Yan Chen , K. J. Ray Liu

We study the growth of a time-ordered rooted tree by probabilistic attachment of new vertices to leaves. We construct a likelihood function of the leaves based on the connectivity of the tree. We take such connectivity to be induced by the…

Data Structures and Algorithms · Computer Science 2020-11-03 Nomvelo Sibisi

Density-driven segregations, extensively studied in a simple rotating drum, are enriched with a wide range of underlying physics. Diverse symmetrical segregation patterns formed by mixing two types of dry mono-sized grains have been…

Soft Condensed Matter · Physics 2025-02-21 Yu Chen , Deheng Wei , Si Suo , Mingrui Dong , Yixiang Gan

We study the large space and time scale behavior of a totally asymmetric, nearest-neighbor exclusion process in one dimension with random jump rates attached to the particles. When slow particles are sufficiently rare the system has a phase…

Probability · Mathematics 2007-05-23 Ilie Grigorescu , Min Kang , Timo Seppalainen

Finding the most powerful node in a dynamic random network, the largest set in a partition-valued stochastic process, or the largest family in an evolving population at a given time, can be a very difficult problem. This is particularly the…

Probability · Mathematics 2020-09-09 Cécile Mailler , Peter Mörters , Anna Senkevich

Conventional approaches for simulating steady-state distributions of particles under diffusive and advective transport at high P\'eclet numbers involve solving the diffusion and advection equations in at least two dimensions. Here, we…

We simulate a densely jammed, athermal assembly of repulsive soft particles immersed in a solvent. Starting from an initial condition corresponding to a quench from a high temperature, we find non-trivial slow dynamics driven by a gradual…

Soft Condensed Matter · Physics 2019-09-11 Rahul N. Chacko , Peter Sollich , Suzanne M. Fielding

This paper investigates the dynamics and optimal harvesting of age-structured populations governed by McKendrick--von Foerster equations, contrasting two distinct harvesting mechanisms: rate-control and effort-control. For the rate-control…

Optimization and Control · Mathematics 2026-04-03 Jiguang Yu , Louis Shuo Wang , Ye Liang

Cells attach to their environment by means of focal adhesions, which are molecular complexes that exhibit the remarkable ability to adapt to mechanical load by changing their size. Drawing from the biomolecular mechanisms underlying this…

Soft Condensed Matter · Physics 2025-03-17 Anton F. Burnet , Julia Müllner , Benedikt Sabass

We study the asymptotic behaviour of random integer partitions under a new probability law that we introduce, the Plancherel-Hurwitz measure. This distribution, which has a natural definition in terms of Young tableaux, is a deformation of…

Combinatorics · Mathematics 2024-07-09 Guillaume Chapuy , Baptiste Louf , Harriet Walsh

We consider a random geometric hypergraph model based on an underlying bipartite graph. Nodes and hyperedges are sampled uniformly in a domain, and a node is assigned to those hyperedges that lie with a certain radius. From a modelling…

Probability · Mathematics 2023-09-19 Henry-Louis de Kergorlay , Desmond J. Higham

We study a general mass transport model on an arbitrary graph consisting of $L$ nodes each carrying a continuous mass. The graph also has a set of directed links between pairs of nodes through which a stochastic portion of mass, chosen from…

Statistical Mechanics · Physics 2007-05-23 M. R. Evans , Satya N. Majumdar , R. K. P. Zia

We consider a collection of weakly interacting diffusion processes moving in a two-scale locally periodic environment. We study the large deviations principle of the empirical distribution of the particles' positions in the combined limit…

Probability · Mathematics 2022-11-03 Zachary Bezemek , Konstantinos Spiliopoulos

We introduce a new model of correlated randomly growing graphs and study the fundamental questions of detecting correlation and estimating aspects of the correlated structure. The model is simple and starts with any model of randomly…

Probability · Mathematics 2020-04-29 Miklos Z. Racz , Anirudh Sridhar

Grid-based storage systems with uniformly shaped loads (e.g., containers, pallets, totes) are commonplace in logistics, industrial, and transportation domains. A key performance metric for such systems is the maximization of space…

Robotics · Computer Science 2025-05-29 Tzvika Geft , Kostas Bekris , Jingjin Yu

We study systems of particles on a line which have a maximum, are locally finite and evolve with independent increments. ``Quasi-stationary states'' are defined as probability measures, on the \sigma-algebra generated by the gap variables,…

Probability · Mathematics 2007-05-23 Anastasia Ruzmaikina , Michael Aizenman

We consider the problem of estimating the division rate of a size-structured population in a nonparametric setting. The size of the system evolves according to a transport-fragmentation equation: each individual grows with a given transport…

Statistics Theory · Mathematics 2013-01-21 Marie Doumic Jauffret , Marc Hoffmann , Patricia Reynaud-Bouret , Vincent Rivoirard

We present an algorithm to simulate random sequential adsorption (random "parking") of discs on constant-curvature surfaces: the plane, sphere, hyperboloid, and projective plane, all embedded in three-dimensional space. We simulate complete…

Statistical Mechanics · Physics 2017-09-18 Elizabeth R. Chen , Miranda Holmes-Cerfon