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The rise of In-Context Learning (ICL) for universal medical image segmentation has introduced an unprecedented demand for large-scale, diverse datasets for training, exacerbating the long-standing problem of data scarcity. While data…

Computer Vision and Pattern Recognition · Computer Science 2025-09-25 Jiesi Hu , Yanwu Yang , Zhiyu Ye , Chenfei Ye , Hanyang Peng , Jianfeng Cao , Ting Ma

Longitudinal medical images are essential for monitoring disease progression by capturing spatiotemporal changes associated with dynamic biological processes. While current methods have made progress in modeling spatiotemporal patterns,…

Quantitative Methods · Quantitative Biology 2025-09-15 Shuaitong Zhang , Yuchen Sun , Yong Ao , Xuehuan Zhang , Ruoshui Yang , Jiantao Xu , Zuwu Ai , Haike Zhang , Xiang Yang , Yao Xu , Kunwei Li , Duanduan Chen

Direct automatic segmentation of objects from 3D medical imaging, such as magnetic resonance (MR) imaging, is challenging as it often involves accurately identifying a number of individual objects with complex geometries within a large…

Image and Video Processing · Electrical Eng. & Systems 2021-09-23 Wei Dai , Boyeong Woo , Siyu Liu , Matthew Marques , Craig B. Engstrom , Peter B. Greer , Stuart Crozier , Jason A. Dowling , Shekhar S. Chandra

Multi-organ segmentation of 3D medical images is fundamental with meaningful applications in various clinical automation pipelines. Although deep learning has achieved superior performance, the time and memory consumption of segmenting the…

Computer Vision and Pattern Recognition · Computer Science 2025-11-12 Xueqi Guo , Halid Ziya Yerebakan , Yoshihisa Shinagawa , Kritika Iyer , Gerardo Hermosillo Valadez

The recent success of Large Language Models (LLMs) has prompted the extension to the multimodal domain, developing image-text Multimodal LLMs (MLLMs) and then video-text models. In this work, we investigate the challenge of contextual and…

Computer Vision and Pattern Recognition · Computer Science 2026-01-01 Hector Rodriguez , Boris Meinardus , Anil Batra , Anna Rohrbach , Marcus Rohrbach

Point tracking in videos is a fundamental task with applications in robotics, video editing, and more. While many vision tasks benefit from pre-trained feature backbones to improve generalizability, point tracking has primarily relied on…

Computer Vision and Pattern Recognition · Computer Science 2025-04-22 Inès Hyeonsu Kim , Seokju Cho , Jiahui Huang , Jung Yi , Joon-Young Lee , Seungryong Kim

Prognostic models aim to predict the future course of a disease or condition and are a vital component of personalized medicine. Statistical models make use of longitudinal data to capture the temporal aspect of disease progression;…

Machine Learning · Computer Science 2020-07-13 Joshua Bridge , Simon P. Harding , Yalin Zheng

This paper aims to solve a fundamental problem in intensity-based 2D/3D registration, which concerns the limited capture range and need for very good initialization of state-of-the-art image registration methods. We propose a regression…

Computer Vision and Pattern Recognition · Computer Science 2017-03-07 Benjamin Hou , Amir Alansary , Steven McDonagh , Alice Davidson , Mary Rutherford , Jo V. Hajnal , Daniel Rueckert , Ben Glocker , Bernhard Kainz

A common approach to medical image analysis on volumetric data uses deep 2D convolutional neural networks (CNNs). This is largely attributed to the challenges imposed by the nature of the 3D data: variable volume size, GPU exhaustion during…

Image and Video Processing · Electrical Eng. & Systems 2020-07-28 Hasib Zunair , Aimon Rahman , Nabeel Mohammed , Joseph Paul Cohen

Dynamic Magnetic Resonance Imaging (MRI) is a crucial non-invasive method used to capture the movement of internal organs and tissues, making it a key tool for medical diagnosis. However, dynamic MRI faces a major challenge: long…

Image and Video Processing · Electrical Eng. & Systems 2024-09-20 Tamir Shor , Chaim Baskin , Alex Bronstein

Longitudinal multimodal data, including electronic health records (EHR) and sequential chest X-rays (CXRs), is critical for modeling disease progression, yet remains underutilized due to two key challenges: (1) redundancy in consecutive CXR…

Computer Vision and Pattern Recognition · Computer Science 2025-10-14 Chen Liu , Wenfang Yao , Kejing Yin , William K. Cheung , Jing Qin

Prostate gland segmentation from T2-weighted MRI is a critical yet challenging task in clinical prostate cancer assessment. While deep learning-based methods have significantly advanced automated segmentation, most conventional…

Image and Video Processing · Electrical Eng. & Systems 2025-06-25 Ahmad Mustafa , Reza Rastegar , Ghassan AlRegib

High spatiotemporal resolution dynamic magnetic resonance imaging (MRI) is a powerful clinical tool for imaging moving structures as well as to reveal and quantify other physical and physiological dynamics. The low speed of MRI necessitates…

Image and Video Processing · Electrical Eng. & Systems 2019-10-14 Yuhua Chen , Jaime L. Shaw , Yibin Xie , Debiao Li , Anthony G. Christodoulou

Surgical phase recognition from video enables various downstream applications. Transformer-based sliding window approaches have set the state-of-the-art by capturing rich spatial-temporal features. However, while transformers can…

Computer Vision and Pattern Recognition · Computer Science 2025-03-04 Hao Ding , Xu Lian , Mathias Unberath

Clinical data for ambulatory care, which accounts for 90% of the nations healthcare spending, is characterized by relatively small sample sizes of longitudinal data, unequal spacing between visits for each patient, with unequal numbers of…

Machine Learning · Computer Science 2018-12-03 Beau Norgeot , Dmytro Lituiev , Benjamin S. Glicksberg , Atul J. Butte

Prognostic tumor growth modeling via volumetric medical imaging observations can potentially lead to better outcomes of tumor treatment and surgical planning. Recent advances of convolutional networks have demonstrated higher accuracy than…

Computer Vision and Pattern Recognition · Computer Science 2019-09-25 Ling Zhang , Le Lu , Xiaosong Wang , Robert M. Zhu , Mohammadhadi Bagheri , Ronald M. Summers , Jianhua Yao

Deep learning has enabled breakthroughs in automated diagnosis from medical imaging, with many successful applications in ophthalmology. However, standard medical image classification approaches only assess disease presence at the time of…

Computer Vision and Pattern Recognition · Computer Science 2024-07-31 Gregory Holste , Mingquan Lin , Ruiwen Zhou , Fei Wang , Lei Liu , Qi Yan , Sarah H. Van Tassel , Kyle Kovacs , Emily Y. Chew , Zhiyong Lu , Zhangyang Wang , Yifan Peng

Phase-contrast magnetic resonance imaging (MRI) provides time-resolved quantification of blood flow dynamics that can aid clinical diagnosis. Long in vivo scan times due to repeated three-dimensional (3D) volume sampling over cardiac phases…

Image and Video Processing · Electrical Eng. & Systems 2020-04-22 Valery Vishnevskiy , Jonas Walheim , Sebastian Kozerke

Existing techniques for dynamic scene reconstruction from multiple wide-baseline cameras primarily focus on reconstruction in controlled environments, with fixed calibrated cameras and strong prior constraints. This paper introduces a…

Computer Vision and Pattern Recognition · Computer Science 2020-08-04 Armin Mustafa , Marco Volino , Hansung Kim , Jean-Yves Guillemaut , Adrian Hilton

Time series forecasting plays a crucial role in various applications, particularly in healthcare, where accurate predictions of future health trajectories can significantly impact clinical decision-making. Ensuring transparency and…

Machine Learning · Computer Science 2025-05-22 Jeremy Qin
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