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DNA barcodes are crucial in biodiversity analysis for building automatic identification systems that recognize known species and discover unseen species. Unlike human genome modeling, barcode-based invertebrate identification poses…

Machine Learning · Computer Science 2024-12-17 Tiancheng Gao , Graham W. Taylor

Acquiring high-quality annotated data for medical image segmentation is tedious and costly. Semi-supervised segmentation techniques alleviate this burden by leveraging unlabeled data to generate pseudo labels. Recently, advanced state space…

Computer Vision and Pattern Recognition · Computer Science 2025-08-20 Shumeng Li , Jian Zhang , Lei Qi , Luping Zhou , Yinghuan Shi , Yang Gao

In the global challenge of understanding and characterizing biodiversity, short species-specific genomic sequences known as DNA barcodes play a critical role, enabling fine-grained comparisons among organisms within the same kingdom of…

The classification of insect pests is a critical task in agricultural technology, vital for ensuring food security and environmental sustainability. However, the complexity of pest identification, due to factors like high camouflage and…

Computer Vision and Pattern Recognition · Computer Science 2024-04-05 Qianning Wang , Chenglin Wang , Zhixin Lai , Yucheng Zhou

Accurate microscopic medical image segmentation plays a crucial role in diagnosing various cancerous cells and identifying tumors. Driven by advancements in deep learning, convolutional neural networks (CNNs) and transformer-based models…

Computer Vision and Pattern Recognition · Computer Science 2025-06-17 Daniya Najiha Abdul Kareem , Abdul Hannan , Mubashir Noman , Jean Lahoud , Mustansar Fiaz , Hisham Cholakkal

Existing salient object detection (SOD) models are generally constrained by the limited receptive fields of convolutional neural networks (CNNs) and quadratic computational complexity of Transformers. Recently, the emerging state-space…

Computer Vision and Pattern Recognition · Computer Science 2026-02-03 Wenzhuo Zhao , Keren Fu , Jiahao He , Xiaohong Liu , Qijun Zhao , Guangtao Zhai

Fine Grained Visual Categorization (FGVC) remains a challenging task in computer vision due to subtle inter class differences and fragile feature representations. Existing methods struggle in fine grained scenarios, especially when labeled…

Computer Vision and Pattern Recognition · Computer Science 2025-06-30 Mingquan Liu

Recurrent neural networks and Transformers have recently dominated most applications in hyperspectral (HS) imaging, owing to their capability to capture long-range dependencies from spectrum sequences. However, despite the success of these…

Computer Vision and Pattern Recognition · Computer Science 2024-04-15 Jing Yao , Danfeng Hong , Chenyu Li , Jocelyn Chanussot

Recent advancements in anomaly detection have seen the efficacy of CNN- and transformer-based approaches. However, CNNs struggle with long-range dependencies, while transformers are burdened by quadratic computational complexity.…

Computer Vision and Pattern Recognition · Computer Science 2025-03-11 Haoyang He , Yuhu Bai , Jiangning Zhang , Qingdong He , Hongxu Chen , Zhenye Gan , Chengjie Wang , Xiangtai Li , Guanzhong Tian , Lei Xie

Scribble annotations significantly reduce the cost and labor required for dense labeling in large medical datasets with complex anatomical structures. However, current scribble-supervised learning methods are limited in their ability to…

Computer Vision and Pattern Recognition · Computer Science 2025-03-04 Luyi Qiu , Tristan Till , Xiaobao Guo , Adams Wai-Kin Kong

Unsupervised graph-level anomaly detection (UGLAD) is a critical and challenging task across various domains, such as social network analysis, anti-cancer drug discovery, and toxic molecule identification. However, existing methods often…

Machine Learning · Computer Science 2025-12-29 Yali Fu , Jindong Li , Qi Wang , Qianli Xing

Linear modeling methods like Mamba have been merged as the effective backbone for the 3D object detection task. However, previous Mamba-based methods utilize the bidirectional encoding for the whole non-empty voxel sequence, which contains…

Computer Vision and Pattern Recognition · Computer Science 2026-02-24 Zhiwei Ning , Xuanang Gao , Jiaxi Cao , Runze Yang , Huiying Xu , Xinzhong Zhu , Jie Yang , Wei Liu

Accurate medical image segmentation remains challenging due to blurred lesion boundaries (LBA), loss of high-frequency details (LHD), and difficulty in modeling long-range anatomical structures (DC-LRSS). Vision Mamba employs…

Computer Vision and Pattern Recognition · Computer Science 2025-07-29 Ze Rong , ZiYue Zhao , Zhaoxin Wang , Lei Ma

Although Mamba models significantly improve hyperspectral image (HSI) classification, one critical challenge is the difficulty in building the sequence of Mamba tokens efficiently. This paper presents a Sparse Deformable Mamba (SDMamba)…

Computer Vision and Pattern Recognition · Computer Science 2025-04-17 Lincoln Linlin Xu , Yimin Zhu , Zack Dewis , Zhengsen Xu , Motasem Alkayid , Mabel Heffring , Saeid Taleghanidoozdoozan

Precision and reliability of barcode-based biodiversity assessment can be affected at several steps during acquisition and analysis of the data. Identification of barcodes is one of the crucial steps in the process and can be accomplished…

Populations and Evolution · Quantitative Biology 2017-04-19 Oleksandr Holovachov , Quiterie Haenel , Sarah J. Bourlat , Ulf Jondelius

Hyperspectral Imaging (HSI) has proven to be a powerful tool for capturing detailed spectral and spatial information across diverse applications. Despite the advancements in Deep Learning (DL) and Transformer architectures for HSI…

Computer Vision and Pattern Recognition · Computer Science 2024-12-02 Muhammad Ahmad , Muhammad Usama , Manuel Mazzara , Salvatore Distefano

3D object detection is critical for autonomous driving, yet it remains fundamentally challenging to simultaneously maximize computational efficiency and capture long-range spatial dependencies. We observed that Mamba-based models, with…

Computer Vision and Pattern Recognition · Computer Science 2025-11-18 Longhui Zheng , Qiming Xia , Xiaolu Chen , Zhaoliang Liu , Chenglu Wen

Multi-modal learning that combines pathological images with genomic data has significantly enhanced the accuracy of survival prediction. Nevertheless, existing methods have not fully utilized the inherent hierarchical structure within both…

Computer Vision and Pattern Recognition · Computer Science 2024-12-05 Ying Chen , Jiajing Xie , Yuxiang Lin , Yuhang Song , Wenxian Yang , Rongshan Yu

Although Mamba models greatly improve Hyperspectral Image (HSI) classification, they have critical challenges in terms defining efficient and adaptive token sequences for improve performance. This paper therefore presents CSSMamba…

Computer Vision and Pattern Recognition · Computer Science 2026-01-23 Zack Dewis , Yimin Zhu , Zhengsen Xu , Mabel Heffring , Saeid Taleghanidoozdoozan , Quinn Ledingham , Lincoln Linlin Xu

Protein function prediction is a pivotal task in drug discovery, significantly impacting the development of effective and safe therapeutics. Traditional machine learning models often struggle with the complexity and variability inherent in…

Machine Learning · Computer Science 2024-09-24 Bohao Xu , Yingzhou Lu , Yoshitaka Inoue , Namkyeong Lee , Tianfan Fu , Jintai Chen
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