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Cognitive computing systems require human labeled data for evaluation, and often for training. The standard practice used in gathering this data minimizes disagreement between annotators, and we have found this results in data that fails to…

Computation and Language · Computer Science 2018-09-27 Anca Dumitrache , Lora Aroyo , Chris Welty

Selecting which claims to check is a time-consuming task for human fact-checkers, especially from documents consisting of multiple sentences and containing multiple claims. However, existing claim extraction approaches focus more on…

Computation and Language · Computer Science 2024-06-13 Zhenyun Deng , Michael Schlichtkrull , Andreas Vlachos

Electronic health records (EHR) contain large volumes of unstructured text, requiring the application of Information Extraction (IE) technologies to enable clinical analysis. We present the open-source Medical Concept Annotation Toolkit…

Extracting key information from documents, such as receipts or invoices, and preserving the interested texts to structured data is crucial in the document-intensive streamline processes of office automation in areas that includes but not…

Computer Vision and Pattern Recognition · Computer Science 2019-06-21 Xiaohui Zhao , Endi Niu , Zhuo Wu , Xiaoguang Wang

Continuity of care is crucial to ensuring positive health outcomes for patients discharged from an inpatient hospital setting, and improved information sharing can help. To share information, caregivers write discharge notes containing…

Computation and Language · Computer Science 2021-06-07 James Mullenbach , Yada Pruksachatkun , Sean Adler , Jennifer Seale , Jordan Swartz , T. Greg McKelvey , Hui Dai , Yi Yang , David Sontag

Large Language Models (LLMs) are increasingly utilized for large-scale extraction and organization of unstructured data owing to their exceptional Natural Language Processing (NLP) capabilities. Empowering materials design, vast amounts of…

Digital Libraries · Computer Science 2025-12-11 Wenkai Ning , Musen Li , Jeffrey R. Reimers , Rika Kobayashi

Understanding medical texts presents significant challenges due to complex terminology and context-specific language. This paper introduces Medalyze, an AI-powered application designed to enhance the comprehension of medical texts using…

Computation and Language · Computer Science 2025-05-26 Van-Tinh Nguyen , Hoang-Duong Pham , Thanh-Hai To , Cong-Tuan Hung Do , Thi-Thu-Trang Dong , Vu-Trung Duong Le , Van-Phuc Hoang

Embedding text sequences is a widespread requirement in modern language understanding. Existing approaches focus largely on constant-size representations. This is problematic, as the amount of information contained in text often varies with…

Computation and Language · Computer Science 2023-10-04 Guanghui Qin , Benjamin Van Durme

We address the extraction of mathematical statements and their proofs from scholarly PDF articles as a multimodal classification problem, utilizing text, font features, and bitmap image renderings of PDFs as distinct modalities. We propose…

Artificial Intelligence · Computer Science 2024-10-14 Shrey Mishra , Antoine Gauquier , Pierre Senellart

A significant and growing number of published scientific articles is found to involve fraudulent practices, posing a serious threat to the credibility and safety of research in fields such as medicine. We propose Pub-Guard-LLM, the first…

Computation and Language · Computer Science 2025-08-22 Lihu Chen , Shuojie Fu , Gabriel Freedman , Cemre Zor , Guy Martin , James Kinross , Uddhav Vaghela , Ovidiu Serban , Francesca Toni

In the era of the Internet of Things (IoT), the retrieval of relevant medical information has become essential for efficient clinical decision-making. This paper introduces MedFusionRank, a novel approach to zero-shot medical information…

Computation and Language · Computer Science 2023-11-01 Yuqi Wang , Zeqiang Wang , Wei Wang , Qi Chen , Kaizhu Huang , Anh Nguyen , Suparna De

The scientific literature is growing exponentially, and professionals are no more able to cope with the current amount of publications. Text mining provided in the past methods to retrieve and extract information from text; however, most of…

Computation and Language · Computer Science 2019-02-27 Nikola Milosevic , Cassie Gregson , Robert Hernandez , Goran Nenadic

With the rapid development of precision medicine, a large amount of health data (such as electronic health records, gene sequencing, medical images, etc.) has been produced. It encourages more and more interest in data-driven insight…

Computation and Language · Computer Science 2019-12-10 Sendong Zhao , Fei Wang

In the digital age, seeking health advice on the Internet has become a common practice. At the same time, determining the trustworthiness of online medical content is increasingly challenging. Fact-checking has emerged as an approach to…

Computation and Language · Computer Science 2024-03-26 Juraj Vladika , Phillip Schneider , Florian Matthes

We present a framework to take advantage of existing labels at inference, called \textit{exemplars}, in order to improve the performance of object detection in medical images. The method, \textit{exemplar diffusion}, leverages existing…

Computer Vision and Pattern Recognition · Computer Science 2026-03-17 Victor Wåhlstrand , Jennifer Alvén , Ida Häggström

Accurate extraction of breast cancer patients' phenotypes is important for clinical decision support and clinical research. Current models do not take full advantage of cancer domain-specific corpus, whether pre-training Bidirectional…

Information Retrieval · Computer Science 2022-03-10 Sicheng Zhou , Liwei Wang , Nan Wang , Hongfang Liu , Rui Zhang

Manual chart review remains an extremely time-consuming and resource-intensive component of clinical research, requiring experts to extract often complex information from unstructured electronic health record (EHR) narratives. We present a…

Fact triples are a common form of structured knowledge used within the biomedical domain. As the amount of unstructured scientific texts continues to grow, manual annotation of these texts for the task of relation extraction becomes…

Computation and Language · Computer Science 2020-05-27 Saadullah Amin , Katherine Ann Dunfield , Anna Vechkaeva , Günter Neumann

There has been a dramatic increase in the popularity of utilizing social media data for research purposes within the biomedical community. In PubMed alone, there have been nearly 2,500 publication entries since 2014 that deal with analyzing…

Information Retrieval · Computer Science 2020-07-16 Ramya Tekumalla , Juan M. Banda

The accurate extraction of medical orders from doctor-patient conversations is a critical task for reducing clinical documentation burdens and ensuring patient safety. This paper details our team submission to the MEDIQA-OE-2025 Shared…

Computation and Language · Computer Science 2025-11-14 Abhinand Balachandran , Bavana Durgapraveen , Gowsikkan Sikkan Sudhagar , Vidhya Varshany J S , Sriram Rajkumar
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