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Medical image segmentation, which aims to automatically extract anatomical or pathological structures, plays a key role in computer-aided diagnosis and disease analysis. Despite the problem has been widely studied, existing methods are…

Image and Video Processing · Electrical Eng. & Systems 2022-03-01 Han Zhang , Lok Ming Lui

Inferring topological and geometrical information from data can offer an alternative perspective on machine learning problems. Methods from topological data analysis, e.g., persistent homology, enable us to obtain such information,…

Computer Vision and Pattern Recognition · Computer Science 2018-02-19 Christoph Hofer , Roland Kwitt , Marc Niethammer , Andreas Uhl

Persistent homology analysis provides means to capture the connectivity structure of data sets in various dimensions. On the mathematical level, by defining a metric between the objects that persistence attaches to data sets, we can…

Machine Learning · Computer Science 2019-06-12 Henri Riihimäki , José Licón-Saláiz

Inspired by certain optimization solvers, the deep unfolding network (DUN) has attracted much attention in recent years for image compressed sensing (CS). However, there still exist the following two issues: 1) In existing DUNs, most…

Computer Vision and Pattern Recognition · Computer Science 2023-10-17 Wenxue Cui , Xiaopeng Fan , Jian Zhang , Debin Zhao

Modern deep neural networks have shown remarkable performance in medical image classification. However, such networks either emphasize pixel-intensity features instead of fundamental anatomical structures (e.g., those encoded by topological…

Computer Vision and Pattern Recognition · Computer Science 2025-12-09 Pengfei Gu , Huimin Li , Haoteng Tang , Dongkuan , Xu , Erik Enriquez , DongChul Kim , Bin Fu , Danny Z. Chen

Topological data analysis (TDA) is a rapidly evolving field in applied mathematics and data science that leverages tools from topology to uncover robust, shape-driven insights in complex datasets. The main workhorse is persistent homology,…

History and Overview · Mathematics 2025-07-29 Zhe Su , Xiang Liu , Layal Bou Hamdan , Vasileios Maroulas , Jie Wu , Gunnar Carlsson , Guo-Wei Wei

We perform topological data analysis on the internal states of convolutional deep neural networks to develop an understanding of the computations that they perform. We apply this understanding to modify the computations so as to (a) speed…

Machine Learning · Computer Science 2018-11-06 Gunnar Carlsson , Rickard Brüel Gabrielsson

Detecting anomalies in dynamic graphs is a vital task, with numerous practical applications in areas such as security, finance, and social media. Previous network embedding based methods have been mostly focusing on learning good node…

Machine Learning · Computer Science 2020-05-26 Lei Cai , Zhengzhang Chen , Chen Luo , Jiaping Gui , Jingchao Ni , Ding Li , Haifeng Chen

This article aims to study the topological invariant properties encoded in node graph representational embeddings by utilizing tools available in persistent homology. Specifically, given a node embedding representation algorithm, we…

Machine Learning · Computer Science 2021-10-12 Mustafa Hajij , Ghada Zamzmi , Xuanting Cai

Learning task-specific representations of persistence diagrams is an important problem in topological data analysis and machine learning. However, current state of the art methods are restricted in terms of their expressivity as they are…

Machine Learning · Computer Science 2021-03-18 Panagiotis Kyriakis , Iordanis Fostiropoulos , Paul Bogdan

Graph neural networks (GNNs) are typically applied to static graphs that are assumed to be known upfront. This static input structure is often informed purely by insight of the machine learning practitioner, and might not be optimal for the…

While many approaches to make neural networks more fathomable have been proposed, they are restricted to interrogating the network with input data. Measures for characterizing and monitoring structural properties, however, have not been…

Machine Learning · Computer Science 2019-09-30 Bastian Rieck , Matteo Togninalli , Christian Bock , Michael Moor , Max Horn , Thomas Gumbsch , Karsten Borgwardt

Persistent homology (PH) is a rigorous mathematical theory that provides a robust descriptor of data in the form of persistence diagrams (PDs) which are 2D multisets of points. Their variable size makes them, however, difficult to combine…

Machine Learning · Statistics 2019-06-14 Bartosz Zielinski , Michal Lipinski , Mateusz Juda , Matthias Zeppelzauer , Pawel Dlotko

Deep neural networks have demonstrated superior performance in artificial intelligence applications, but the opaqueness of their inner working mechanism is one major drawback in their application. The prevailing unit-based interpretation is…

Computer Vision and Pattern Recognition · Computer Science 2024-02-29 Lei Lyu , Chen Pang , Jihua Wang

The development of practical applications, such as autonomous driving and robotics, has brought increasing attention to 3D point cloud understanding. While deep learning has achieved remarkable success on image-based tasks, there are many…

Computer Vision and Pattern Recognition · Computer Science 2021-05-25 Haoming Lu , Humphrey Shi

Techniques from computational topology, in particular persistent homology, are becoming increasingly relevant for data analysis. Their stable metrics permit the use of many distance-based data analysis methods, such as multidimensional…

Algebraic Topology · Mathematics 2021-01-20 Bastian Rieck , Filip Sadlo , Heike Leitte

Persistence diagrams (PDs) play a key role in topological data analysis (TDA), in which they are routinely used to describe topological properties of complicated shapes. PDs enjoy strong stability properties and have proven their utility in…

Computational Geometry · Computer Science 2017-11-10 Mathieu Carrière , Marco Cuturi , Steve Oudot

We start with a simple introduction to topological data analysis where the most popular tool is called a persistent diagram. Briefly, a persistent diagram is a multiset of points in the plane describing the persistence of topological…

Statistics Theory · Mathematics 2017-06-28 Christophe Biscio , Jesper Møller

Point cloud based place recognition is still an open issue due to the difficulty in extracting local features from the raw 3D point cloud and generating the global descriptor, and it's even harder in the large-scale dynamic environments. In…

Computer Vision and Pattern Recognition · Computer Science 2019-08-20 Zhe Liu , Shunbo Zhou , Chuanzhe Suo , Yingtian Liu , Peng Yin , Hesheng Wang , Yun-Hui Liu

Topological data analysis offers a rich source of valuable information to study vision problems. Yet, so far we lack a theoretically sound connection to popular kernel-based learning techniques, such as kernel SVMs or kernel PCA. In this…

Machine Learning · Statistics 2014-12-24 Jan Reininghaus , Stefan Huber , Ulrich Bauer , Roland Kwitt
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