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Convolutional neural networks (CNN) have been frequently used to extract subject-invariant features from electroencephalogram (EEG) for classification tasks. This approach holds the underlying assumption that electrodes are equidistant…

Machine Learning · Computer Science 2021-06-18 Andac Demir , Toshiaki Koike-Akino , Ye Wang , Masaki Haruna , Deniz Erdogmus

This paper introduces a generative model equivariant to Euclidean symmetries: E(n) Equivariant Normalizing Flows (E-NFs). To construct E-NFs, we take the discriminative E(n) graph neural networks and integrate them as a differential…

Machine Learning · Computer Science 2022-01-17 Victor Garcia Satorras , Emiel Hoogeboom , Fabian B. Fuchs , Ingmar Posner , Max Welling

Graphs are one of the most important data structures for representing pairwise relations between objects. Specifically, a graph embedded in a Euclidean space is essential to solving real problems, such as physical simulations. A crucial…

Machine Learning · Computer Science 2021-03-11 Masanobu Horie , Naoki Morita , Toshiaki Hishinuma , Yu Ihara , Naoto Mitsume

Several recent papers have proposed increasing the expressive power of graph neural networks by exploiting subgraphs or other topological structures. In parallel, researchers have investigated higher order permutation equivariant networks.…

Machine Learning · Statistics 2026-02-05 Andrew Hands , Tianyi Sun , Risi Kondor

Signed Graph Neural Networks (SGNNs) have been shown to be effective in analyzing complex patterns in real-world situations where positive and negative links coexist. However, SGNN models suffer from poor explainability, which limit their…

Machine Learning · Computer Science 2024-12-13 Lu Li , Jiale Liu , Xingyu Ji , Maojun Wang , Zeyu Zhang

Recent developments in the field of quantum machine learning have promoted the idea of incorporating physical symmetries in the structure of quantum circuits. A crucial milestone in this area is the realization of $S_{n}$-permutation…

Quantum Physics · Physics 2024-08-20 Zhelun Li , Lento Nagano , Koji Terashi

Accurately predicting the elastic properties of crystalline solids is vital for computational materials science. However, traditional atomistic scale ab initio approaches are computationally intensive, especially for studying complex…

Disordered Systems and Neural Networks · Physics 2023-11-13 Teerachote Pakornchote , Annop Ektarawong , Thiparat Chotibut

Network data can be conveniently modeled as a graph signal, where data values are assigned to nodes of a graph that describes the underlying network topology. Successful learning from network data is built upon methods that effectively…

Machine Learning · Computer Science 2021-05-26 Fernando Gama , Elvin Isufi , Geert Leus , Alejandro Ribeiro

Incorporating inductive biases into ML models is an active area of ML research, especially when ML models are applied to data about the physical world. Equivariant Graph Neural Networks (GNNs) have recently become a popular method for…

Machine Learning · Computer Science 2023-11-07 Savannah Thais , Daniel Murnane

Conformal symmetries, i.e.\ coordinate transformations that preserve angles, play a key role in many fields, including physics, mathematics, computer vision and (geometric) machine learning. Here we build a neural network that is…

Machine Learning · Computer Science 2025-05-20 Maksim Zhdanov , Nabil Iqbal , Erik Bekkers , Patrick Forré

Convolutional Neural Networks (CNNs) have become the method of choice for learning problems involving 2D planar images. However, a number of problems of recent interest have created a demand for models that can analyze spherical images.…

Machine Learning · Computer Science 2019-04-23 Taco S. Cohen , Mario Geiger , Jonas Koehler , Max Welling

Graph Convolutional Networks (GCNs) have recently become the primary choice for learning from graph-structured data, superseding hash fingerprints in representing chemical compounds. However, GCNs lack the ability to take into account the…

Machine Learning · Computer Science 2020-07-03 Tomasz Danel , Przemysław Spurek , Jacek Tabor , Marek Śmieja , Łukasz Struski , Agnieszka Słowik , Łukasz Maziarka

Structure-informed protein representation learning is essential for effective protein function annotation and \textit{de novo} design. However, the presence of inherent noise in both crystal and AlphaFold-predicted structures poses…

Biomolecules · Quantitative Biology 2025-03-25 Zhongyue Zhang , Runze Ma , Yanjie Huang , Shuangjia Zheng

Incorporating permutation equivariance into neural networks has proven to be useful in ensuring that models respect symmetries that exist in data. Symmetric tensors, which naturally appear in statistics, machine learning, and graph theory,…

Machine Learning · Computer Science 2025-05-26 Edward Pearce-Crump

Supervised learning with deep models has tremendous potential for applications in materials science. Recently, graph neural networks have been used in this context, drawing direct inspiration from models for molecules. However, materials…

Materials Science · Physics 2023-01-18 Sékou-Oumar Kaba , Siamak Ravanbakhsh

Convolutional neural networks (CNNs) have been widely used in various vision tasks, e.g. image classification, semantic segmentation, etc. Unfortunately, standard 2D CNNs are not well suited for spherical signals such as panorama images or…

Computer Vision and Pattern Recognition · Computer Science 2022-09-05 Yuqi Liu , Yin Wang , Haikuan Du , Shen Cai

Graph Neural Networks (GNNs) with equivariant properties have emerged as powerful tools for modeling complex dynamics of multi-object physical systems. However, their generalization ability is limited by the inadequate consideration of…

Machine Learning · Computer Science 2024-03-13 Yang Liu , Jiashun Cheng , Haihong Zhao , Tingyang Xu , Peilin Zhao , Fugee Tsung , Jia Li , Yu Rong

Despite their widespread success in various domains, Transformer networks have yet to perform well across datasets in the domain of 3D atomistic graphs such as molecules even when 3D-related inductive biases like translational invariance…

Machine Learning · Computer Science 2023-03-01 Yi-Lun Liao , Tess Smidt

Predicting the binding sites of target proteins plays a fundamental role in drug discovery. Most existing deep-learning methods consider a protein as a 3D image by spatially clustering its atoms into voxels and then feed the voxelized…

Biomolecules · Quantitative Biology 2024-07-24 Yang Zhang , Zhewei Wei , Ye Yuan , Chongxuan Li , Wenbing Huang

Spherical convolutional neural networks (Spherical CNNs) learn nonlinear representations from 3D data by exploiting the data structure and have shown promising performance in shape analysis, object classification, and planning among others.…

Machine Learning · Computer Science 2021-04-06 Zhan Gao , Fernando Gama , Alejandro Ribeiro
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