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While graph neural networks (GNNs) have been successful for node classification tasks and link prediction tasks in graph, learning graph-level representations still remains a challenge. For the graph-level representation, it is important to…

Machine Learning · Computer Science 2023-03-02 Sangseon Lee , Dohoon Lee , Yinhua Piao , Sun Kim

Graph neural networks have emerged as a leading architecture for many graph-level tasks, such as graph classification and graph generation. As an essential component of the architecture, graph pooling is indispensable for obtaining a…

Machine Learning · Computer Science 2023-06-23 Chuang Liu , Yibing Zhan , Jia Wu , Chang Li , Bo Du , Wenbin Hu , Tongliang Liu , Dacheng Tao

We introduce PyTorch Geometric High Order (PyGHO), a library for High Order Graph Neural Networks (HOGNNs) that extends PyTorch Geometric (PyG). Unlike ordinary Message Passing Neural Networks (MPNNs) that exchange messages between nodes,…

Machine Learning · Computer Science 2023-11-29 Xiyuan Wang , Muhan Zhang

Graph pooling is a family of operations which take graphs as input and produce shrinked graphs as output. Modern graph pooling methods are trainable and, in general inserted in Graph Neural Networks (GNNs) architectures as graph shrinking…

Machine Learning · Computer Science 2024-12-05 Yizhu Chen

The growing popularity of generative flow networks (GFlowNets or GFNs) from a range of researchers with diverse backgrounds and areas of expertise necessitates a library that facilitates the testing of new features (e.g., training losses…

Machine Learning · Computer Science 2026-03-23 Joseph D. Viviano , Omar G. Younis , Sanghyeok Choi , Victor Schmidt , Yoshua Bengio , Salem Lahlou

Graph Pooling technology plays an important role in graph node classification tasks. Sorting pooling technologies maintain large-value units for pooling graphs of varying sizes. However, by analyzing the statistical characteristic of…

Computer Vision and Pattern Recognition · Computer Science 2024-08-20 Hao Xu , Jia Liu , Yang Shen , Kenan Lou , Yanxia Bao , Ruihua Zhang , Shuyue Zhou , Hongsen Zhao , Shuai Wang

We propose a deep Graph Neural Network (GNN) model that alternates two types of layers. The first type is inspired by Reservoir Computing (RC) and generates new vertex features by iterating a non-linear map until it converges to a fixed…

Machine Learning · Computer Science 2021-04-13 Filippo Maria Bianchi , Claudio Gallicchio , Alessio Micheli

Graph pooling is a crucial operation for encoding hierarchical structures within graphs. Most existing graph pooling approaches formulate the problem as a node clustering task which effectively captures the graph topology. Conventional…

Artificial Intelligence · Computer Science 2023-10-12 Sung Moon Ko , Sungjun Cho , Dae-Woong Jeong , Sehui Han , Moontae Lee , Honglak Lee

Graph classification is an important problem with applications across many domains, like chemistry and bioinformatics, for which graph neural networks (GNNs) have been state-of-the-art (SOTA) methods. GNNs are designed to learn node-level…

Machine Learning · Computer Science 2021-08-25 Lanning Wei , Huan Zhao , Quanming Yao , Zhiqiang He

Graph Neural networks (GNNs) have recently become a powerful technique for many graph-related tasks including graph classification. Current GNN models apply different graph pooling methods that reduce the number of nodes and edges to learn…

Machine Learning · Computer Science 2023-03-08 Muhammad Ifte Khairul Islam , Max Khanov , Esra Akbas

We introduce PyTorch Geometric, a library for deep learning on irregularly structured input data such as graphs, point clouds and manifolds, built upon PyTorch. In addition to general graph data structures and processing methods, it…

Machine Learning · Computer Science 2019-04-26 Matthias Fey , Jan Eric Lenssen

Graph Neural Networks (GNNs) are attracting growing attention due to their effectiveness and flexibility in modeling a variety of graph-structured data. Exiting GNN architectures usually adopt simple pooling operations (eg. sum, average,…

Machine Learning · Computer Science 2022-10-21 Chenqing Hua , Guillaume Rabusseau , Jian Tang

Graph neural networks (GNNs) are one of the most popular approaches to using deep learning on graph-structured data, and they have shown state-of-the-art performances on a variety of tasks. However, according to a recent study, a careful…

Machine Learning · Computer Science 2021-10-08 Jihoon Ko , Taehyung Kwon , Kijung Shin , Juho Lee

Graph neural networks (GNNs) have demonstrated a significant success in various graph learning tasks, from graph classification to anomaly detection. There recently has emerged a number of approaches adopting a graph pooling operation…

Machine Learning · Computer Science 2023-03-28 Yuzhou Chen , Yulia R. Gel

Graph pooling methods have been widely used on downsampling graphs, achieving impressive results on multiple graph-level tasks like graph classification and graph generation. An important line called node dropping pooling aims at exploiting…

Artificial Intelligence · Computer Science 2023-11-01 Gaichao Li , Jinsong Chen , John E. Hopcroft , Kun He

Graph Neural Networks (GNNs), which generalize deep neural networks to graph-structured data, have drawn considerable attention and achieved state-of-the-art performance in numerous graph related tasks. However, existing GNN models mainly…

Machine Learning · Computer Science 2019-12-30 Zhen Zhang , Jiajun Bu , Martin Ester , Jianfeng Zhang , Chengwei Yao , Zhi Yu , Can Wang

Graph neural networks have attracted wide attentions to enable representation learning of graph data in recent works. In complement to graph convolution operators, graph pooling is crucial for extracting hierarchical representation of graph…

Machine Learning · Computer Science 2020-06-22 Xing Gao , Wenrui Dai , Chenglin Li , Hongkai Xiong , Pascal Frossard

Graph pooling compresses graph information into a compact representation. State-of-the-art graph pooling methods follow a hierarchical approach, which reduces the graph size step-by-step. These methods must balance memory efficiency with…

Machine Learning · Computer Science 2024-02-23 Yunchong Song , Siyuan Huang , Xinbing Wang , Chenghu Zhou , Zhouhan Lin

Recent advancements in graph representation learning have led to the emergence of condensed encodings that capture the main properties of a graph. However, even though these abstract representations are powerful for downstream tasks, they…

Machine Learning · Computer Science 2020-02-21 Cristian Bodnar , Cătălina Cangea , Pietro Liò

Graph Neural Networks (GNNs) have proven effective for learning from graph-structured data through their neighborhood-based message passing framework. Many hierarchical graph clustering pooling methods modify this framework by introducing…

Machine Learning · Computer Science 2025-05-15 Yipeng Zhang , Longlong Li , Kelin Xia
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