English
Related papers

Related papers: STARK denoises spatial transcriptomics images via …

200 papers

We introduce a method for fast estimation of data-adapted, spatio-temporally dependent regularization parameter-maps for variational image reconstruction, focusing on total variation (TV)-minimization. Our approach is inspired by recent…

Recovering a low-rank signal matrix from its noisy observation, commonly known as matrix denoising, is a fundamental inverse problem in statistical signal processing. Matrix denoising methods are generally based on shrinkage or thresholding…

Methodology · Statistics 2017-01-23 Santosh Kumar Yadav , Rohit Sinha , Prabin Kumar Bora

Learned image compression methods have shown superior rate-distortion performance and remarkable potential compared to traditional compression methods. Most existing learned approaches use stacked convolution or window-based self-attention…

Image and Video Processing · Electrical Eng. & Systems 2024-01-03 Huairui Wang , Nianxiang Fu , Zhenzhong Chen , Shan Liu

We introduce a generative smoothness regularization on manifolds (SToRM) model for the recovery of dynamic image data from highly undersampled measurements. The model assumes that the images in the dataset are non-linear mappings of…

Image and Video Processing · Electrical Eng. & Systems 2021-03-12 Qing Zou , Abdul Haseeb Ahmed , Prashant Nagpal , Stanley Kruger , Mathews Jacob

We describe novel subgradient methods for a broad class of matrix optimization problems involving nuclear norm regularization. Unlike existing approaches, our method executes very cheap iterations by combining low-rank stochastic…

Machine Learning · Computer Science 2012-07-03 Haim Avron , Satyen Kale , Shiva Kasiviswanathan , Vikas Sindhwani

Dynamic imaging addresses the recovery of a time-varying 2D or 3D object at each time instant using its undersampled measurements. In particular, in the case of dynamic tomography, only a single projection at a single view angle may be…

Image and Video Processing · Electrical Eng. & Systems 2024-05-09 Berk Iskender , Marc L. Klasky , Yoram Bresler

Image tokenizers play a central role in modern generative models, where the structure of the latent space critically determines the downstream generation performance. A key but underexplored property of effective latent representations is…

Computer Vision and Pattern Recognition · Computer Science 2026-05-20 Jinsung Lee , Jaemin Oh , Namhun Kim , Dongwon Kim , Byung-Jun Yoon , Suha Kwak

Spectrum cartography reconstructs spatial radio fields from sparse and heterogeneous wireless measurements, underpinning many sensing and optimization tasks in wireless networks. Attention mechanisms have recently enabled adaptive…

Optimization and Control · Mathematics 2026-04-29 Liping Tao , Chee Wei Tan

Monte Carlo path tracer renders noisy image sequences at low sampling counts. Although great progress has been made on denoising such sequences, existing methods still suffer from spatial and temporary artifacts. In this paper, we tackle…

Computer Vision and Pattern Recognition · Computer Science 2021-03-31 Tiange Xiang , Hongliang Yuan , Haozhi Huang , Yujin Shi

Background: Spatial transcriptomics have emerged as a powerful tool in biomedical research because of its ability to capture both the spatial contexts and abundance of the complete RNA transcript profile in organs of interest. However,…

Genomics · Quantitative Biology 2025-04-18 Shuo Shuo Liu , Shikun Wang , Yuxuan Chen , Anil K. Rustgi , Ming Yuan , Jianhua Hu

Kernel ridge regression (KRR) is a widely used nonparametric method due to its strong theoretical guarantees and computational convenience. However, standard KRR does not distinguish between linear and nonlinear components in the signal,…

Statistics Theory · Mathematics 2026-05-13 Xin Bing , Chao Wang

An efficient spatial regularization method using superpixel segmentation and graph Laplacian regularization is proposed for sparse hyperspectral unmixing method. Since it is likely to find spectrally similar pixels in a homogeneous region,…

Computer Vision and Pattern Recognition · Computer Science 2020-09-15 Taner Ince

Monte-Carlo path tracing is a powerful technique for realistic image synthesis but suffers from high levels of noise at low sample counts, limiting its use in real-time applications. To address this, we propose a framework with end-to-end…

Computer Vision and Pattern Recognition · Computer Science 2023-10-06 Antoine Scardigli , Lukas Cavigelli , Lorenz K. Müller

Spatial transcriptomics technologies enable the measurement of gene expression with spatial context, providing opportunities to understand how gene regulatory networks vary across tissue regions. However, existing graphical models focus…

Methodology · Statistics 2025-12-15 Trisha Dawn , Yang Ni

The inherent ill-posed nature of image reconstruction problems, due to limitations in the physical acquisition process, is typically addressed by introducing a regularisation term that incorporates prior knowledge about the underlying…

Image and Video Processing · Electrical Eng. & Systems 2025-03-11 Naïl Khelifa , Ferdia Sherry , Carola-Bibiane Schönlieb

Matrix form data sets arise in many areas, so there are lots of works about the matrix regression models. One special model of these models is the adaptive nuclear norm regularized trace regression, which has been proven have good…

Methodology · Statistics 2024-04-16 Pan Shang , Lingchen Kong

Spatial Transcriptomics (ST) is a technology that measures gene expression profiles within tissue sections while retaining spatial context. It reveals localized gene expression patterns and tissue heterogeneity, both of which are essential…

Quantitative Methods · Quantitative Biology 2026-03-24 Wei Zhang , Jiajun Chu , Xinci Liu , Chen Tong , Xinyue Li

Thermal infrared (TIR) target tracking methods often adopt the correlation filter (CF) framework due to its computational efficiency. However, the low resolution of TIR images, along with tracking interference, significantly limits the…

Computer Vision and Pattern Recognition · Computer Science 2025-04-22 Shang Zhang , Xiaobo Ding , Huanbin Zhang , Ruoyan Xiong , Yue Zhang

Kernel methods have achieved very good performance on large scale regression and classification problems, by using the Nystr\"om method and preconditioning techniques. The Nystr\"om approximation -- based on a subset of landmarks -- gives a…

Machine Learning · Computer Science 2020-02-21 Michaël Fanuel , Joachim Schreurs , Johan A. K. Suykens

We present a method for supervised learning of sparsity-promoting regularizers for image denoising. Sparsity-promoting regularization is a key ingredient in solving modern image reconstruction problems; however, the operators underlying…

Image and Video Processing · Electrical Eng. & Systems 2020-06-11 Michael T. McCann , Saiprasad Ravishankar