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The field of computer-aided synthesis planning (CASP) has seen rapid advancements in recent years, achieving significant progress across various algorithmic benchmarks. However, chemists often encounter numerous infeasible reactions when…

Machine Learning · Computer Science 2024-09-09 Shang Xiang , Lin Yao , Zhen Wang , Qifan Yu , Wentan Liu , Wentao Guo , Guolin Ke

Deep learning models for anticipating the products of organic reactions have found many use cases, including validating retrosynthetic pathways and constraining synthesis-based molecular design tools. Despite compelling performance on…

Machine Learning · Computer Science 2025-01-14 John Bradshaw , Anji Zhang , Babak Mahjour , David E. Graff , Marwin H. S. Segler , Connor W. Coley

Spectral image reconstruction is an important task in snapshot compressed imaging. This paper aims to propose a new end-to-end framework with iterative capabilities similar to a deep unfolding network to improve reconstruction accuracy,…

Image and Video Processing · Electrical Eng. & Systems 2023-05-09 Zeyu Cai , Jian Yu , Ziyu Zhang , Chengqian Jin , Feipeng Da

Identifying reliable synthesis pathways in materials chemistry is a complex task, particularly in polymer science, due to the intricate and often non-unique nomenclature of macromolecules. To address this challenge, we propose an agent…

Artificial Intelligence · Computer Science 2025-04-16 Qinyu Ma , Yuhao Zhou , Jianfeng Li

Inference from large autoregressive models like Transformers is slow - decoding K tokens takes K serial runs of the model. In this work we introduce speculative decoding - an algorithm to sample from autoregressive models faster without any…

Machine Learning · Computer Science 2023-05-22 Yaniv Leviathan , Matan Kalman , Yossi Matias

Relational tables, where each row corresponds to an entity and each column corresponds to an attribute, have been the standard for tables in relational databases. However, such a standard cannot be taken for granted when dealing with tables…

Databases · Computer Science 2023-08-10 Peng Li , Yeye He , Cong Yan , Yue Wang , Surajit Chaudhuri

Pretrained transformers readily adapt to new sequence modeling tasks via zero-shot prompting, but relational domains still lack architectures that transfer across datasets and tasks. The core challenge is the diversity of relational data,…

Pre-trained Transformers are good foundations for unified multi-task models owing to their task-agnostic representation. Pre-trained Transformers are often combined with text-to-text framework to execute multiple tasks by a single model.…

Computation and Language · Computer Science 2022-03-16 Taichi Iki , Akiko Aizawa

Vision Transformers are at the heart of the current surge of interest in foundation models for histopathology. They process images by breaking them into smaller patches following a regular grid, regardless of their content. Yet, not all…

Computer Vision and Pattern Recognition · Computer Science 2024-04-30 Clément Grisi , Geert Litjens , Jeroen van der Laak

Transformers have become methods of choice in many applications thanks to their ability to represent complex interactions between elements. However, extending the Transformer architecture to non-sequential data such as molecules and…

Machine Learning · Computer Science 2022-04-27 Yoni Choukroun , Lior Wolf

Entropy modeling is a key component for high-performance image compression algorithms. Recent developments in autoregressive context modeling helped learning-based methods to surpass their classical counterparts. However, the performance of…

Image and Video Processing · Electrical Eng. & Systems 2024-02-28 A. Burakhan Koyuncu , Han Gao , Atanas Boev , Georgii Gaikov , Elena Alshina , Eckehard Steinbach

Polymers are candidate materials for a wide range of sustainability applications such as carbon capture and energy storage. However, computational polymer discovery lacks automated analysis of reaction pathways and stability assessment…

Chemical Physics · Physics 2023-10-18 Brenda S. Ferrari , Matteo Manica , Ronaldo Giro , Teodoro Laino , Mathias B. Steiner

Scaling Transformers typically necessitates training larger models from scratch, as standard architectures struggle to expand without discarding learned representations. We identify the primary bottleneck in the attention mechanism's linear…

Machine Learning · Computer Science 2026-04-22 Weijie Zhao , Mingquan Liu , Bolun Wang , Simo Wu , Nuobei Xie , Rui-Jie Zhu , Peng Zhou

Reaction and retrosynthesis prediction are fundamental tasks in computational chemistry that have recently garnered attention from both the machine learning and drug discovery communities. Various deep learning approaches have been proposed…

Machine Learning · Computer Science 2023-06-29 Ziqiao Meng , Peilin Zhao , Yang Yu , Irwin King

Transformer-based models have advanced the field of question answering, but multi-hop reasoning, where answers require combining evidence across multiple passages, remains difficult. This paper presents a comprehensive evaluation of…

Computer Vision and Pattern Recognition · Computer Science 2025-09-29 Zichen Zhang , Kunlong Zhang , Hongwei Ruan , Yiming Luo

In this work, we present a new approach to high level synthesis (HLS), where high level functions are first mapped to an architectural template, before hardware synthesis is performed. As FPGA platforms are especially suitable for…

Hardware Architecture · Computer Science 2016-06-22 Shaoyi Cheng , John Wawrzynek

Retrosynthesis, which aims to identify viable synthetic pathways for target molecules by decomposing them into simpler precursors, is often treated as a search problem. However, its complexity arises from multi-branched tree-structured…

Artificial Intelligence · Computer Science 2025-11-25 Chengyang Tian , Yuhang Chang , Yangpeng Zhang , Yang Liu

In this paper, we propose a new Transformer block for video future frames prediction based on an efficient local spatial-temporal separation attention mechanism. Based on this new Transformer block, a fully autoregressive video future…

Computer Vision and Pattern Recognition · Computer Science 2022-03-31 Xi Ye , Guillaume-Alexandre Bilodeau

The Transformer architecture has significantly advanced deep learning, particularly in natural language processing, by effectively managing long-range dependencies. However, as the demand for understanding complex relationships grows,…

Computation and Language · Computer Science 2024-06-18 Qian Chen , Wen Wang , Qinglin Zhang , Siqi Zheng , Shiliang Zhang , Chong Deng , Hai Yu , Jiaqing Liu , Yukun Ma , Chong Zhang

Video prediction has witnessed the emergence of RNN-based models led by ConvLSTM, and CNN-based models led by SimVP. Following the significant success of ViT, recent works have integrated ViT into both RNN and CNN frameworks, achieving…

Computer Vision and Pattern Recognition · Computer Science 2026-01-15 Yujin Tang , Lu Qi , Xiangtai Li , Chao Ma , Ming-Hsuan Yang