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The field of computer-aided synthesis planning (CASP) has seen rapid advancements in recent years, achieving significant progress across various algorithmic benchmarks. However, chemists often encounter numerous infeasible reactions when…
Deep learning models for anticipating the products of organic reactions have found many use cases, including validating retrosynthetic pathways and constraining synthesis-based molecular design tools. Despite compelling performance on…
Spectral image reconstruction is an important task in snapshot compressed imaging. This paper aims to propose a new end-to-end framework with iterative capabilities similar to a deep unfolding network to improve reconstruction accuracy,…
Identifying reliable synthesis pathways in materials chemistry is a complex task, particularly in polymer science, due to the intricate and often non-unique nomenclature of macromolecules. To address this challenge, we propose an agent…
Inference from large autoregressive models like Transformers is slow - decoding K tokens takes K serial runs of the model. In this work we introduce speculative decoding - an algorithm to sample from autoregressive models faster without any…
Relational tables, where each row corresponds to an entity and each column corresponds to an attribute, have been the standard for tables in relational databases. However, such a standard cannot be taken for granted when dealing with tables…
Pretrained transformers readily adapt to new sequence modeling tasks via zero-shot prompting, but relational domains still lack architectures that transfer across datasets and tasks. The core challenge is the diversity of relational data,…
Pre-trained Transformers are good foundations for unified multi-task models owing to their task-agnostic representation. Pre-trained Transformers are often combined with text-to-text framework to execute multiple tasks by a single model.…
Vision Transformers are at the heart of the current surge of interest in foundation models for histopathology. They process images by breaking them into smaller patches following a regular grid, regardless of their content. Yet, not all…
Transformers have become methods of choice in many applications thanks to their ability to represent complex interactions between elements. However, extending the Transformer architecture to non-sequential data such as molecules and…
Entropy modeling is a key component for high-performance image compression algorithms. Recent developments in autoregressive context modeling helped learning-based methods to surpass their classical counterparts. However, the performance of…
Polymers are candidate materials for a wide range of sustainability applications such as carbon capture and energy storage. However, computational polymer discovery lacks automated analysis of reaction pathways and stability assessment…
Scaling Transformers typically necessitates training larger models from scratch, as standard architectures struggle to expand without discarding learned representations. We identify the primary bottleneck in the attention mechanism's linear…
Reaction and retrosynthesis prediction are fundamental tasks in computational chemistry that have recently garnered attention from both the machine learning and drug discovery communities. Various deep learning approaches have been proposed…
Transformer-based models have advanced the field of question answering, but multi-hop reasoning, where answers require combining evidence across multiple passages, remains difficult. This paper presents a comprehensive evaluation of…
In this work, we present a new approach to high level synthesis (HLS), where high level functions are first mapped to an architectural template, before hardware synthesis is performed. As FPGA platforms are especially suitable for…
Retrosynthesis, which aims to identify viable synthetic pathways for target molecules by decomposing them into simpler precursors, is often treated as a search problem. However, its complexity arises from multi-branched tree-structured…
In this paper, we propose a new Transformer block for video future frames prediction based on an efficient local spatial-temporal separation attention mechanism. Based on this new Transformer block, a fully autoregressive video future…
The Transformer architecture has significantly advanced deep learning, particularly in natural language processing, by effectively managing long-range dependencies. However, as the demand for understanding complex relationships grows,…
Video prediction has witnessed the emergence of RNN-based models led by ConvLSTM, and CNN-based models led by SimVP. Following the significant success of ViT, recent works have integrated ViT into both RNN and CNN frameworks, achieving…