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Molecular subtypes of colorectal cancer (CRC) significantly influence treatment decisions. While convolutional neural networks (CNNs) have recently been introduced for automated CRC subtype identification using H&E stained histopathological…

Computer Vision and Pattern Recognition · Computer Science 2024-09-13 Hadar Hezi , Daniel Shats , Daniel Gurevich , Yosef E. Maruvka , Moti Freiman

Contrastive learning (CL) has become a powerful approach for learning representations from unlabeled images. However, existing CL methods focus predominantly on visual appearance features while neglecting topological characteristics (e.g.,…

Computer Vision and Pattern Recognition · Computer Science 2026-03-17 Guangyu Meng , Pengfei Gu , Peixian Liang , John P. Lalor , Erin Wolf Chambers , Danny Z. Chen

Graph representation learning has attracted a surge of interest recently, whose target at learning discriminant embedding for each node in the graph. Most of these representation methods focus on supervised learning and heavily depend on…

Machine Learning · Computer Science 2021-07-07 Pengpeng Shao , Tong Liu , Dawei Zhang , Jianhua Tao , Feihu Che , Guohua Yang

Graph contrastive learning (GCL) has recently emerged as an effective learning paradigm to alleviate the reliance on labelling information for graph representation learning. The core of GCL is to maximise the mutual information between the…

Machine Learning · Computer Science 2022-10-18 Yizhen Zheng , Yu Zheng , Xiaofei Zhou , Chen Gong , Vincent CS Lee , Shirui Pan

Graphs model complex relationships between entities, with nodes and edges capturing intricate connections. Node representation learning involves transforming nodes into low-dimensional embeddings. These embeddings are typically used as…

Machine Learning · Computer Science 2024-11-04 Ying-Chun Lin , Jennifer Neville

Cross-modal retrieval (CMR) typically involves learning common representations to directly measure similarities between multimodal samples. Most existing CMR methods commonly assume multimodal samples in pairs and employ joint training to…

Computer Vision and Pattern Recognition · Computer Science 2025-01-13 Ruitao Pu , Yang Qin , Dezhong Peng , Xiaomin Song , Huiming Zheng

Supervised contrastive learning (SCL) frameworks treat each class as independent and thus consider all classes to be equally important. This neglects the common scenario in which label hierarchy exists, where fine-grained classes under the…

Machine Learning · Computer Science 2024-02-02 Ruixue Lian , William A. Sethares , Junjie Hu

Vehicle re-identification (Vehicle ReID) aims at retrieving vehicle images across disjoint surveillance camera views. The majority of vehicle ReID research is heavily reliant upon supervisory labels from specific human-collected datasets…

Computer Vision and Pattern Recognition · Computer Science 2024-10-30 Zhigang Chang , Shibao Zheng

Unsupervised visible-infrared person re-identification (USL-VI-ReID) seeks to match pedestrian images of the same individual across different modalities without human annotations for model learning. Previous methods unify pseudo-labels of…

Computer Vision and Pattern Recognition · Computer Science 2025-05-07 De Cheng , Lingfeng He , Nannan Wang , Dingwen Zhang , Xinbo Gao

Self-supervised learning (SSL) has demonstrated its effectiveness in learning representations through comparison methods that align with human intuition. However, mainstream SSL methods heavily rely on high body datasets with single label,…

Computer Vision and Pattern Recognition · Computer Science 2025-07-01 Jiale Chen

Graph classification has gained significant attention due to its applications in chemistry, social networks, and bioinformatics. While Graph Neural Networks (GNNs) effectively capture local structural patterns, they often overlook global…

Machine Learning · Computer Science 2025-12-03 Ahmet Sami Korkmaz , Selim Coskunuzer , Md Joshem Uddin

Recently, clustering with deep network framework has attracted attention of several researchers in the computer vision community. Deep framework gains extensive attention due to its efficiency and scalability towards large-scale and…

Computer Vision and Pattern Recognition · Computer Science 2019-06-18 Jayasree Saha , Jayanta Mukhopadhyay

The field of generating recommendations within the framework of causal inference has seen a recent surge, with recommendations being likened to treatments. This approach enhances insights into the influence of recommendations on user…

Information Retrieval · Computer Science 2023-08-21 Guanglin Zhou , Chengkai Huang , Xiaocong Chen , Xiwei Xu , Chen Wang , Liming Zhu , Lina Yao

High-content screening (HCS) assays based on high-throughput microscopy techniques such as Cell Painting have enabled the interrogation of cells' morphological responses to perturbations at an unprecedented scale. The collection of such…

Machine Learning · Computer Science 2025-09-25 Mingyu Lu , Ethan Weinberger , Chanwoo Kim , Su-In Lee

Preserving maximal information is one of principles of designing self-supervised learning methodologies. To reach this goal, contrastive learning adopts an implicit way which is contrasting image pairs. However, we believe it is not fully…

Computer Vision and Pattern Recognition · Computer Science 2022-04-14 Hong-Yu Zhou , Chixiang Lu , Sibei Yang , Xiaoguang Han , Yizhou Yu

Graph-level representations are critical in various real-world applications, such as predicting the properties of molecules. But in practice, precise graph annotations are generally very expensive and time-consuming. To address this issue,…

Machine Learning · Computer Science 2022-07-26 Shuai Lin , Pan Zhou , Zi-Yuan Hu , Shuojia Wang , Ruihui Zhao , Yefeng Zheng , Liang Lin , Eric Xing , Xiaodan Liang

Skin image datasets often suffer from imbalanced data distribution, exacerbating the difficulty of computer-aided skin disease diagnosis. Some recent works exploit supervised contrastive learning (SCL) for this long-tailed challenge.…

Computer Vision and Pattern Recognition · Computer Science 2023-07-11 Yilan Zhang , Jianqi Chen , Ke Wang , Fengying Xie

Leading graph contrastive learning (GCL) methods perform graph augmentations in two fashions: (1) randomly corrupting the anchor graph, which could cause the loss of semantic information, or (2) using domain knowledge to maintain salient…

Machine Learning · Computer Science 2022-06-17 Sihang Li , Xiang Wang , An zhang , Yingxin Wu , Xiangnan He , Tat-Seng Chua

The exploration of cellular heterogeneity within the tumor microenvironment (TME) via single-cell RNA sequencing (scRNA-seq) is essential for understanding cancer progression and response to therapy. Current scRNA-seq approaches, however,…

Genomics · Quantitative Biology 2025-02-06 Yu-An Huang , Yue-Chao Li , Hai-Ru You , Jie Pan , Xiyue Cao , Xinyuan Li , Zhi-An Huang , Zhu-Hong You

Single-cell RNA sequencing (scRNA-seq) is essential for unraveling cellular heterogeneity and diversity, offering invaluable insights for bioinformatics advancements. Despite its potential, traditional clustering methods in scRNA-seq data…

Machine Learning · Computer Science 2025-10-01 Ping Xu , Zhiyuan Ning , Meng Xiao , Guihai Feng , Xin Li , Yuanchun Zhou , Pengfei Wang