Related papers: Universal Hirschberg for Width Bounded Dynamic Pro…
Given $n$ points in the plane, we propose algorithms to compile connected crossing-free geometric graphs into directed acyclic graphs (DAGs). The DAGs allow efficient counting, enumeration, random sampling, and optimization. Our algorithms…
There has been a growing interest in causal learning in recent years. Commonly used representations of causal structures, including Bayesian networks and structural equation models (SEM), take the form of directed acyclic graphs (DAGs). We…
The width $k$ of a directed acyclic graph (DAG) $G = (V, E)$ equals the largest number of pairwise non-reachable vertices. Computing the width dates back to Dilworth's and Fulkerson's results in the 1950s, and is doable in quadratic time in…
In edge orientations, the goal is usually to orient (direct) the edges of an undirected $n$-vertex graph $G$ such that all out-degrees are bounded. When the graph $G$ is fully dynamic, i.e., admits edge insertions and deletions, we wish to…
We consider the problem of throughput-optimal broadcast- ing in time-varying wireless networks, whose underlying topology is restricted to Directed Acyclic Graphs (DAG). Previous broadcast algorithms route packets along spanning trees. In…
Multiple sequence alignment (MSA) is a ubiquitous problem in computational biology. Although it is NP-hard to find an optimal solution for an arbitrary number of sequences, due to the importance of this problem researchers are trying to…
We present practical linear and almost linear-time algorithms to compute a chain decomposition of a directed acyclic graph (DAG), $G=(V,E)$. The number of vertex-disjoint chains computed is very close to the minimum. The time complexity of…
The use of Hirschberg algorithm reduces the spatial cost of recovering the Longest Common Subsequence to linear space. The same technique can be applied to similar problems like Sequence Alignment. However, the price to pay is a duplication…
We give new deterministic bounds for fully-dynamic graph connectivity. Our data structure supports updates (edge insertions/deletions) in $O(\log^2n/\log\log n)$ amortized time and connectivity queries in $O(\log n/\log\log n)$ worst-case…
We propose a linear-time, single-pass, top-down algorithm for multiple testing on directed acyclic graphs (DAGs), where nodes represent hypotheses and edges specify a partial ordering in which hypotheses must be tested. The procedure is…
In this paper, we present a quantum algorithm for dynamic programming approach for problems on directed acyclic graphs (DAGs). The running time of the algorithm is $O(\sqrt{\hat{n}m}\log \hat{n})$, and the running time of the best known…
Generalizing work of K\"unnemann, Paturi, and Schneider [ICALP 2017], we study a wide class of high-dimensional dynamic programming (DP) problems in which one must find the shortest path between two points in a high-dimensional grid given a…
The branch-and-bound algorithm based on decision diagrams introduced by Bergman et al. in 2016 is a framework for solving discrete optimization problems with a dynamic programming formulation. It works by compiling a series of bounded-width…
Continuous optimization has significantly advanced causal discovery, yet existing methods (e.g., NOTEARS) generally guarantee only asymptotic convergence to a stationary point. This often yields dense weighted matrices that require…
We study the following generalization of the well-known model of broadcasting on trees. Consider an infinite directed acyclic graph (DAG) with a unique source node $X$. Let the collection of nodes at distance $k$ from $X$ be called the…
Dynamic programming on various graph decompositions is one of the most fundamental techniques used in parameterized complexity. Unfortunately, even if we consider concepts as simple as path or tree decompositions, such dynamic programming…
The ``state-of-the-art'' in Length Limited Huffman Coding algorithms is the $\Theta(ND)$-time, $\Theta(N)$-space one of Hirschberg and Larmore, where $D\le N$ is the length restriction on the code. This is a very clever, very problem…
In this paper, we present a quantum algorithm for the dynamic programming approach for problems on directed acyclic graphs (DAGs). The running time of the algorithm is $O(\sqrt{\hat{n}m}\log \hat{n})$, and the running time of the best known…
This paper introduces OptimizedDP, a high-performance software library for several common grid-based dynamic programming (DP) algorithms used in control theory and robotics. Specifically, OptimizedDP provides functions to numerically solve…
We study reachability and shortest paths problems in dynamic directed graphs. Whereas algebraic dynamic data structures supporting edge updates and reachability/distance queries have been known for quite a long time, they do not, in…