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We use a three-bead-spring model to investigate the dynamics of bi-flagellate micro-swimmers near a surface. While the primary dynamics and scattering are governed by geometric-dependent direct contact, the fluid flows generated by the…

Biological Physics · Physics 2017-08-17 Enkeleida Lushi , Vasily Kantsler , Raymond E. Goldstein

Recent work has identified persistent cluster states which were shown to be assembled and held together by hydrodynamic interactions alone [Driscoll \textit{et al.} (2017) Nature Physics, 13(4), 375]. These states were seen in systems of…

Fluid Dynamics · Physics 2019-04-10 Blaise Delmotte

Hydrodynamic interactions between swimming or flying organisms can lead to complex flows on the scale of the group. These emergent fluid dynamics are often more complex than a linear superposition of individual organism flows, especially at…

Fluid Dynamics · Physics 2024-12-23 Nina Mohebbi , Joonha Hwang , Matthew K. Fu , John O. Dabiri

Dense bacterial suspensions exhibit turbulent-like flows at low Reynolds numbers, driven by the activity of the microswimmers. In this study, we develop a model system to examine these dynamics using motile colloids that mimic bacterial…

Fluid Dynamics · Physics 2025-02-25 Rui Luo , Alexey Snezhko , Petia M. Vlahovska

The collective motion of microswimmers in suspensions induce patterns of vortices on scales that are much larger than the characteristic size of a microswimmer, attaining a state called bacterial turbulence. Hydrodynamic turbulence acts on…

Fluid Dynamics · Physics 2019-08-02 Moritz Linkmann , Guido Boffetta , M. Cristina Marchetti , Bruno Eckhardt

The dynamics of periodic swimming is studied for two models of a deformable sphere, the dipole-quadrupole model and the quadrupole-octupole model. For the two models the solution of the Navier-Stokes equations can be found exactly to second…

Fluid Dynamics · Physics 2019-12-18 B. U. Felderhof , R. B. Jones

The phoretic Brownian dynamics method is shown here to be an effective approach to simulate the properties of colloidal chemophoretic based systems. The method is then optimized to allow for the comparison with results from multiparticle…

Soft Condensed Matter · Physics 2024-06-17 Surabhi Jaiswal , Marisol Ripoll , Snigdha Thakur

We perform Brownian dynamics simulations in two dimensions to study the collective behavior of circle swimmers, which are driven by both, an (effective) translational and rotational self-propulsion, and interact via steric repulsion. We…

Soft Condensed Matter · Physics 2021-06-09 Guo-Jun Liao , Sabine H. L. Klapp

Brownian motion has served as a pilot of studies in diffusion and other transport phenomena for over a century. The foundation of Brownian motion, laid by Einstein, has generally been accepted to be far from being complete since the late…

Statistical Mechanics · Physics 2017-06-06 Hanqing Zhao , Hong Zhao

We study diffusion of colloids on a fluid-fluid interface using particle simulations and fluctuating hydrodynamics. Diffusion on a two-dimensional interface with three-dimensional hydrodynamics is known to be anomalous, with the collective…

Statistical Mechanics · Physics 2018-08-01 R. P. Peláez , F. Balboa Usabiaga , S. Panzuela , Q. Xiao , R. Delgado-Buscalioni , A. Donev

Natural habitats of most living microorganisms are distinguished by a complex structure often formed by a porous medium such as soil. The dynamics and transport properties of motile microorganisms are strongly affected by crowded and…

Soft Condensed Matter · Physics 2023-06-23 Florian von Rüling , Liubov Bakhchova , Ulrike Steinmann , Alexey Eremin

We propose a hydrodynamic model for a spheroidal microswimmer with two tangential surface velocity modes. This model is analytically solvable and reduces to Lighthill's and Blake's spherical squirmer model in the limit of equal major and…

Biological Physics · Physics 2024-06-03 Mario Theers , Elmar Westphal , Gerhard Gompper , Roland G. Winkler

Active colloids, also known as artificial microswimmers, are self-propelled micro and nanoparticles that convert uniform sources of fuel (e.g. chemical) or uniform external driving fields (e.g. magnetic or electric) into directed motion by…

Soft Condensed Matter · Physics 2017-01-30 Songbo Ni , Emanuele Marini , Ivo Buttinoni , Heiko Wolf , Lucio Isa

It is known that a full description of Brownian motion in the entire course of time should incorporate both kinetic and hydrodynamic effects, but a formula accounts for both effects has been established only in three dimension and only for…

Statistical Mechanics · Physics 2018-02-13 Hanqing Zhao , Hong Zhao

Recent research has shown that motile cells can adapt their mode of propulsion depending on the environment in which they find themselves. One mode is swimming by blebbing or other shape changes, and in this paper we analyze a class of…

Fluid Dynamics · Physics 2016-10-10 Qixuan Wang , Hans G. Othmer

We study active agents embedded in bulk or in confinement explicitly considering hydrodynamics and simulating the swimmers via an implementation inspired by the squirmer model. We develop a Dissipative Particle Dynamics scheme for the…

The collective dynamics of externally driven $N_{\rm p}$-colloidal systems ($1\le N_{\rm p}\le 4$) in a confined viscous fluid have been investigated using three-dimensional direct numerical simulations with fully resolved hydrodynamics.…

Soft Condensed Matter · Physics 2018-04-04 Norihiro Oyama , Kosuke Teshigawara , John Jairo Molina , Ryoichi Yamamoto , Takashi Taniguchi

Geometric confinements are frequently encountered in soft matter systems and in particular significantly alter the dynamics of swimming microorganisms in viscous media. Surface-related effects on the motility of microswimmers can lead to…

The dispersion of a passive colloid immersed in a bath of non-interacting and non-Brownian run-and-tumble microswimmers in two dimensions is analyzed using stochastic simulations and an asymptotic theory, both based on a minimal model of…

Soft Condensed Matter · Physics 2024-03-18 Tanumoy Dhar , David Saintillan

Experiments have recently shown the feasibility of utilising bacteria as micro-scale robotic devices, with special attention paid to the development of bacteria-driven micro-swimmers taking advantage of built-in actuation and sensing…

Soft Condensed Matter · Physics 2019-02-14 Christian Esparza Lopez , Albane Thery , Eric Lauga