English
Related papers

Related papers: Emergent memory in cell-like active systems

200 papers

Synthetic biology aims at designing modular genetic circuits that can be assembled according to the desired function. When embedded in a cell, a circuit module becomes a small subnetwork within a larger environmental network, and its…

Molecular Networks · Quantitative Biology 2019-01-14 Johannes Falk , Leo Bronstein , Maleen Hanst , Barbara Drossel , Heinz Koeppl

In this book chapter, we review how systems of simple motile agents can be used as a pathway to intelligent systems. It is a well known result from nature that large groups of entities following simple rules, such as swarms of animals, can…

Soft Condensed Matter · Physics 2025-12-17 Julian Jeggle , Raphael Wittkowski

We offer a very simple model of how collective memory may form. Agents keep signalling within neighbourhoods, and depending on how many support each signal, some signals "win" in that neighbourhood. By agents interacting between different…

Formal Languages and Automata Theory · Computer Science 2021-06-23 R. Ramanujam

Agent memory shapes how Large Language Model (LLM)-powered agents, akin to the human brain, progressively refine themselves through environment interactions. Existing paradigms remain constrained: parametric memory forcibly adjusts model…

Computation and Language · Computer Science 2025-10-14 Guibin Zhang , Muxin Fu , Shuicheng Yan

We explore how physical scale and population size shape the emergence of complex behaviors in open-ended ecological environments. In our setting, agents are unsupervised and have no explicit rewards or learning objectives but instead evolve…

Emergence and emergent behaviors are often defined as cases where changes in local interactions between agents at a lower level effectively changes what occurs in the higher level of the system (i.e., the whole swarm) and its properties.…

Robotics · Computer Science 2024-04-01 Ricardo Vega , Connor Mattson , Daniel S. Brown , Cameron Nowzari

These lecture notes are designed to provide a brief introduction into the phenomenology of active matter and to present some of the analytical tools used to rationalize the emergent behavior of active systems. Such systems are made of…

Soft Condensed Matter · Physics 2018-07-02 Étienne Fodor , M. Cristina Marchetti

In model-based learning, an agent's model is commonly defined over transitions between consecutive states of an environment even though planning often requires reasoning over multi-step timescales, with intermediate states either…

Machine Learning · Computer Science 2020-10-06 Alexey Zakharov , Matthew Crosby , Zafeirios Fountas

We investigate the behavioral patterns of a population of agents, each controlled by a simple biologically motivated neural network model, when they are set in competition against each other in the Minority Model of Challet and Zhang. We…

Adaptation and Self-Organizing Systems · Physics 2007-05-23 Joseph Wakeling , Per Bak

The effect of short-term and long-term memory on spontaneous aggregation of organisms is investigated using a stochastic agent-based model. Each individual modulates the amplitude of its random motion according to the perceived local…

Dynamical Systems · Mathematics 2026-02-17 Radek Erban , Jan Haskovec

In the paper the memory effect in the system consisting from a trajectory of process and an environment is considered. The environment is presented by scalar potential and noise. The evolution of system is interpreted as process of the…

General Physics · Physics 2008-01-28 Maxim Budaev

Multi-agent reinforcement learning (MARL) extends (single-agent) reinforcement learning (RL) by introducing additional agents and (potentially) partial observability of the environment. Consequently, algorithms for solving MARL problems…

Multiagent Systems · Computer Science 2019-09-12 Yilun Zhou , Derrik E. Asher , Nicholas R. Waytowich , Julie A. Shah

We demonstrate how collective memory emerges in decentralized multi-agent systems through the interplay between individual agent memory and environmental trace communication. Our agents maintain internal memory states while depositing…

Multiagent Systems · Computer Science 2025-12-12 Khushiyant

The Hopfield model provides a mathematically idealized yet insightful framework for understanding the mechanisms of memory storage and retrieval in the human brain. This model has inspired four decades of extensive research on learning and…

Neurons and Cognition · Quantitative Biology 2025-05-14 Simone Betteti , Giacomo Baggio , Francesco Bullo , Sandro Zampieri

Recently it has been demonstrated that causal entropic forces can lead to the emergence of complex phenomena associated with human cognitive niche such as tool use and social cooperation. Here I show that even more fundamental traits…

Information Theory · Computer Science 2016-04-20 Fouad Khan

The term active matter describes diverse systems, spanning macroscopic (e.g. shoals of fish and flocks of birds) to microscopic scales (e.g. migrating cells, motile bacteria and gels formed through the interaction of nanoscale molecular…

Soft Condensed Matter · Physics 2010-03-11 Gautam I. Menon

Many biological systems collectively construct complex, adaptive, and functional architectures, where function emerges from bottom-up building processes rather than top-down planning or centralized control. However, general strategies for…

Soft Condensed Matter · Physics 2026-04-15 Andrew Slezak , Varda F. Hagh

Living in groups brings benefits to many animals, such as a protection against predators and an improved capacity for sensing and making decisions while searching for resources in uncertain environments. A body of studies has shown how…

Populations and Evolution · Quantitative Biology 2019-01-23 Andrea Falcón-Cortés , Denis Boyer , Gabriel Ramos-Fernández

Active particles are entities that sustain persistent out-of-equilibrium motion by consuming energy. Under certain conditions, they exhibit the tendency to self-organize through coordinated movements, such as swarming via aggregation. While…

Adaptation and Self-Organizing Systems · Physics 2026-04-09 Siddharth Chaturvedi , Ahmed EL-Gazzar , Marcel van Gerven

Collective decision-making arises from individual agents integrating their own personal observations with information obtained from social partners. In many biological systems that exhibit collective decision-making, the process by which…

Quantitative Methods · Quantitative Biology 2026-04-28 Ling-Wei Kong , Naomi Ehrich Leonard , Andrew M. Hein