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Understanding the neural mechanisms underlying the transitions between different states of consciousness is a fundamental challenge in neuroscience. Thus, we investigate the underlying drivers of changes during the resting-state dynamics of…

Neurons and Cognition · Quantitative Biology 2024-07-10 Joseph Bodenheimer , Paul Bogdan , Sérgio Pequito , Arian Ashourvan

Demystifying effective connectivity among neuronal populations has become the trend to understand the brain mechanisms of Parkinson's disease, schizophrenia, mild traumatic brain injury, and many other unlisted neurological diseases.…

Quantitative Methods · Quantitative Biology 2019-09-27 Po-Ya Hsu

Creating a quantitative theory for the cortex presents challenges and raises questions. What are the significant scales--micro, meso, or macroscopic? What are the interactions--pairwise, higher order, or mean-field? And what control…

Neurons and Cognition · Quantitative Biology 2025-05-29 Nima Dehghani

Neural or cortical fields are continuous assemblies of mesoscopic models, also called neural masses, of neural populations that are fundamental in the modeling of macroscopic parts of the brain. Neural fields are described by nonlinear…

Dynamical Systems · Mathematics 2010-09-22 Romain Veltz , Olivier Faugeras

A central challenge in the computational modeling of neural dynamics is the trade-off between accuracy and simplicity. At the level of individual neurons, nonlinear dynamics are both experimentally established and essential for neuronal…

Objective Kalman filtering has previously been applied to track neural model states and parameters, particularly at the scale relevant to EEG. However, this approach lacks a reliable method to determine the initial filter conditions and…

This technical note introduces parametric dynamic causal modelling, a method for inferring slow changes in biophysical parameters that control fluctuations of fast neuronal states. The application domain we have in mind is inferring slow…

Quantitative Methods · Quantitative Biology 2020-08-27 Amirhossein Jafarian , Peter Zeidman , Rob. C Wykes , Matthew Walker , Karl J. Friston

Traditionally, parameter estimation in biophysical neuron and neural network models usually adopts a global search algorithm, often combined with a local search method in order to minimize the value of a cost function, which measures the…

Quantitative Methods · Quantitative Biology 2012-03-05 Dimitrios V. Vavoulis , Volko A. Straub , John A. D. Aston , Jianfeng Feng

Computational models of cortical activity provide insight into the mechanisms of higher-order processing in the human brain including planning, perception and the control of movement. Activity in the cortex is ongoing even in the absence of…

Neurons and Cognition · Quantitative Biology 2023-07-07 Lysea Haggie , Thor Besier , Angus McMorland

In this paper we prove the propagation of chaos property for an ensemble of interacting neurons subject to independent Brownian noise. The propagation of chaos property means that in the large network size limit, the neurons behave as if…

Probability · Mathematics 2017-05-03 Jamil Salhi , James MacLaurin , Salwa Toumi

We present a microscopic approach for the coupling of cortical activity, as resulting from proper dipole currents of pyramidal neurons, to the electromagnetic field in extracellular fluid in presence of diffusion and Ohmic conduction.…

Neurons and Cognition · Quantitative Biology 2013-10-08 Peter beim Graben , Serafim Rodrigues

An ensemble of pulse-coupled phase-oscillators is thoroughly analysed in the presence of a mean-field coupling and a dispersion of their natural frequencies. In spite of the analogies with the Kuramoto setup, a much richer scenario is…

Chaotic Dynamics · Physics 2017-11-06 Ekkehard Ullner , Antonio Politi

Many phenomena in nature are described by excitable systems driven by colored noise. The temporal correlations in the fluctuations hinder an analytical treatment. We here present a general method of reduction to a white-noise system,…

Statistical Mechanics · Physics 2015-11-25 Jannis Schuecker , Markus Diesmann , Moritz Helias

A synaptic theory of Working Memory (WM) has been developed in the last decade as a possible alternative to the persistent spiking paradigm. In this context, we have developed a neural mass model able to reproduce exactly the dynamics of…

Neurons and Cognition · Quantitative Biology 2025-05-29 Halgurd Taher , Alessandro Torcini , Simona Olmi

The experimental study of neural networks requires simultaneous measurements of a massive number of neurons, while monitoring properties of the connectivity, synaptic strengths and delays. Current technological barriers make such a mission…

Neurons and Cognition · Quantitative Biology 2016-01-12 Amir Goldental , Pinhas Sabo , Shira Sardi , Roni Vardi , Ido Kanter

Partial synchronization plays a crucial role in the functioning of neuronal networks: selective, coordinated activation of neurons enables information processing that flexibly adapts to a changing computational context. Since the structure…

Neurons and Cognition · Quantitative Biology 2025-06-17 Daniil Radushev , Olesia Dogonasheva , Boris Gutkin , Denis Zakharov

Adaptive behavior emerges through a dynamic interaction between cognitive agents and changing environmental demands. The investigation of information processing underlying adaptive behavior relies on controlled experimental settings in…

Neurons and Cognition · Quantitative Biology 2020-11-30 Marco D'Alessandro , Stefan T. Radev , Andreas Voss , Luigi Lombardi

Despite substantial progress in deep learning approaches to time-series reconstruction, no existing methods are designed to uncover local activities with minute signal strength due to their negligible contribution to the optimization loss.…

Machine Learning · Computer Science 2022-09-27 Maryam Toloubidokhti , Ryan Missel , Xiajun Jiang , Niels Otani , Linwei Wang

We propose a novel, lightweight, and physically inspired approach to modeling the dynamics of parallel distributed-memory programs. Inspired by the Kuramoto model, we represent MPI processes as coupled oscillators with topology-aware…

Distributed, Parallel, and Cluster Computing · Computer Science 2025-06-04 Ayesha Afzal , Georg Hager , Gerhard Wellen

This paper presents a method for the detection of traveling waves of activity in neural recordings from multi-electrode arrays. The method converts local field potential measurements into the phase domain and fits a series of linear models…

Neurons and Cognition · Quantitative Biology 2015-01-05 Bronwyn Woods
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