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We use topological data analysis to study "functional networks" that we construct from time-series data from both experimental and synthetic sources. We use persistent homology with a weight rank clique filtration to gain insights into…

Quantitative Methods · Quantitative Biology 2017-05-24 Bernadette J. Stolz , Heather A. Harrington , Mason A. Porter

Techniques from computational topology, in particular persistent homology, are becoming increasingly relevant for data analysis. Their stable metrics permit the use of many distance-based data analysis methods, such as multidimensional…

Algebraic Topology · Mathematics 2021-01-20 Bastian Rieck , Filip Sadlo , Heike Leitte

In recent decades, digital image processing has gained enormous popularity. Consequently, a number of data compression strategies have been put forth, with the goal of minimizing the amount of information required to represent images. Among…

Image and Video Processing · Electrical Eng. & Systems 2023-07-04 Suman Kunwar

We present a parallelizable algorithm for computing the persistent homology of a filtered chain complex. Our approach differs from the commonly used reduction algorithm by first computing persistence pairs within local chunks, then…

Algebraic Topology · Mathematics 2013-03-05 Ulrich Bauer , Michael Kerber , Jan Reininghaus

Tumor segmentation in whole-slide images of histology slides is an important step towards computer-assisted diagnosis. In this work, we propose a tumor segmentation framework based on the novel concept of persistent homology profiles…

Computer Vision and Pattern Recognition · Computer Science 2018-05-11 Talha Qaiser , Yee-Wah Tsang , Daiki Taniyama , Naoya Sakamoto , Kazuaki Nakane , David Epstein , Nasir Rajpoot

We present a novel direction-aware feature-level frequency decomposition network for single image deraining. Compared with existing solutions, the proposed network has three compelling characteristics. First, unlike previous algorithms, we…

Computer Vision and Pattern Recognition · Computer Science 2021-06-16 Sen Deng , Yidan Feng , Mingqiang Wei , Haoran Xie , Yiping Chen , Jonathan Li , Xiao-Ping Zhang , Jing Qin

The design of a neural image compression network is governed by how well the entropy model matches the true distribution of the latent code. Apart from the model capacity, this ability is indirectly under the effect of how close the relaxed…

Image and Video Processing · Electrical Eng. & Systems 2023-09-21 Ali Zafari , Atefeh Khoshkhahtinat , Piyush Mehta , Mohammad Saeed Ebrahimi Saadabadi , Mohammad Akyash , Nasser M. Nasrabadi

Fourier ptychography is a new computational microscopy technique that provides gigapixel-scale intensity and phase images with both wide field-of-view and high resolution. By capturing a stack of low-resolution images under different…

A suitable feature representation that can both preserve the data intrinsic information and reduce data complexity and dimensionality is key to the performance of machine learning models. Deeply rooted in algebraic topology, persistent…

Algebraic Topology · Mathematics 2018-11-02 Chi Seng Pun , Kelin Xia , Si Xian Lee

Inpainting-based image compression is a promising alternative to classical transform-based lossy codecs. Typically it stores a carefully selected subset of all pixel locations and their colour values. In the decoding phase the missing…

Image and Video Processing · Electrical Eng. & Systems 2023-05-16 Ferdinand Jost , Vassillen Chizhov , Joachim Weickert

Deployment of machine learning algorithms into real-world practice is still a difficult task. One of the challenges lies in the unpredictable variability of input data, which may differ significantly among individual users, institutions,…

Computer Vision and Pattern Recognition · Computer Science 2024-11-26 Roman Stoklasa

In computer vision, keypoint detection is a fundamental task, with applications spanning from robotics to image retrieval; however, existing learning-based methods suffer from scale dependency and lack flexibility. This paper introduces a…

Computer Vision and Pattern Recognition · Computer Science 2024-06-04 Giovanni Barbarani , Francesco Vaccarino , Gabriele Trivigno , Marco Guerra , Gabriele Berton , Carlo Masone

In this paper we propose a method of corner detection for obtaining features which is required to track and recognize objects within a noisy image. Corner detection of noisy images is a challenging task in image processing. Natural images…

Computer Vision and Pattern Recognition · Computer Science 2012-09-14 Nilanjan Dey , Pradipti Nandi , Nilanjana Barman

It is a high cost problem for panoramic image stitching via image matching algorithm and not practical for real-time performance. In this paper, we take full advantage ofHarris corner invariant characterization method light intensity…

Computer Vision and Pattern Recognition · Computer Science 2016-05-30 Rajer Sindhu

Persistent homology is an important methodology in topological data analysis which adapts theory from algebraic topology to data settings. Computing persistent homology produces persistence diagrams, which have been successfully used in…

Machine Learning · Statistics 2026-01-13 Yueqi Cao , Anthea Monod

To obtain the initial pressure from the collected data on a planar sensor arrangement in Photoacoustic tomography, there exists an exact analytic frequency domain reconstruction formula. An efficient realization of this formula needs to…

Numerical Analysis · Mathematics 2015-01-14 Julian Schmid , Thomas Glatz , Behrooz Zabihian , Mengyang Liu , Wolfgang Drexler , Otmar Scherzer

Topological features play an essential role in ensuring geometric plausibility and structural consistency in image analysis tasks such as segmentation and skeletonization. However, integrating topology-preserving learning based on simple…

Computer Vision and Pattern Recognition · Computer Science 2026-05-01 Wenxiao Li , Faqiang Wang , Yuping Duan , Li Cui , Liqiang Zhang , Jun Liu

In this paper we present a new approach to computing homology (with field coefficients) and persistent homology. We use concepts from discrete Morse theory, to provide an algorithm which can be expressed solely in terms of simple graph…

Algebraic Topology · Mathematics 2012-10-26 Paweł Dłotko , Hubert Wagner

In medical image analysis, feature engineering plays an important role in the design and performance of machine learning models. Persistent homology (PH), from the field of topological data analysis (TDA), demonstrates robustness and…

Computer Vision and Pattern Recognition · Computer Science 2025-06-05 Dashti A. Ali , Richard K. G. Do , William R. Jarnagin , Aras T. Asaad , Amber L. Simpson

Fourier ptychographic microscopy (FPM) is a recently proposed computational imaging technique with both high resolution and wide field-of-view. In current FP experimental setup, the dark-field images with high-angle illuminations are easily…

Computer Vision and Pattern Recognition · Computer Science 2017-12-19 Yan Zhang , An Pan , Ming Lei , Baoli Yao
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