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Over the past few decades, neuroscience experiments have become increasingly complex and naturalistic. Experimental design has in turn become more challenging, as experiments must conform to an ever-increasing diversity of design…

Neurons and Cognition · Quantitative Biology 2020-12-07 Storm Slivkoff , Jack L. Gallant

Shapley values have emerged as a widely accepted and trustworthy tool, grounded in theoretical axioms, for addressing challenges posed by black-box models like deep neural networks. However, computing Shapley values encounters exponential…

Machine Learning · Computer Science 2024-05-24 Borui Zhang , Baotong Tian , Wenzhao Zheng , Jie Zhou , Jiwen Lu

Performant numerical solving of differential equations is required for large-scale scientific modeling. In this manuscript we focus on two questions: (1) how can researchers empirically verify theoretical advances and consistently compare…

Software Engineering · Computer Science 2018-07-18 Christopher Rackauckas , Qing Nie

Optimal use of computing resources requires extensive coding, tuning and benchmarking. To boost developer productivity in these time consuming tasks, we introduce the Experimental Linear Algebra Performance Studies framework (ELAPS), a…

Performance · Computer Science 2015-05-01 Elmar Peise , Paolo Bientinesi

Robotic manipulation in real-world settings remains challenging, especially regarding robust generalization. Existing simulation platforms lack sufficient support for exploring how policies adapt to varied instructions and scenarios. Thus,…

Robotics · Computer Science 2025-06-13 Ning Gao , Yilun Chen , Shuai Yang , Xinyi Chen , Yang Tian , Hao Li , Haifeng Huang , Hanqing Wang , Tai Wang , Jiangmiao Pang

The finite element method (FEM) is a well-established numerical method for solving partial differential equations (PDEs). However, its mesh-based nature gives rise to substantial computational costs, especially for complex multiscale…

Computational Engineering, Finance, and Science · Computer Science 2025-06-24 Weihang Ouyang , Yeonjong Shin , Si-Wei Liu , Lu Lu

The rapid rise of scientific machine learning (SciML) has expanded the role of differentiable modeling, surrogate modeling, and data-driven constitutive laws in large-scale simulation. The JAX framework provides an attractive environment…

Mathematical Software · Computer Science 2026-04-27 Alberto Cattaneo , M Keith Ballard , Robert M. Kirby , Varun Shankar

Matrix-vector multiplications are a fundamental building block of artificial intelligence; this essential role has motivated their implementation in a variety of physical substrates, from memristor crossbar arrays to photonic integrated…

Soft Condensed Matter · Physics 2024-10-01 Theophile Louvet , Parisa Omidvar , Marc Serra-Garcia

When physical testbeds are out of reach for evaluating a networked system, we frequently turn to simulation. In today's datacenter networks, bottlenecks are rarely at the network protocol level, but instead in end-host software or hardware…

Networking and Internet Architecture · Computer Science 2024-02-09 Hejing Li , Praneeth Balasubramanian , Marvin Meiers , Jialin Li , Antoine Kaufmann

We present FlowPM, a Particle-Mesh (PM) cosmological N-body code implemented in Mesh-TensorFlow for GPU-accelerated, distributed, and differentiable simulations. We implement and validate the accuracy of a novel multi-grid scheme based on…

Cosmology and Nongalactic Astrophysics · Physics 2020-10-23 Chirag Modi , Francois Lanusse , Uros Seljak

Computing derivatives of noisy measurement data is ubiquitous in the physical, engineering, and biological sciences, and it is often a critical step in developing dynamic models or designing control. Unfortunately, the mathematical…

Dynamical Systems · Mathematics 2020-09-09 Floris van Breugel , J. Nathan Kutz , Bingni W. Brunton

Large deep learning models have demonstrated strong ability to solve many tasks across a wide range of applications. Those large models typically require training and inference to be distributed. Tensor parallelism is a common technique…

Unpacking and comprehending how black-box machine learning algorithms make decisions has been a persistent challenge for researchers and end-users. Explaining time-series predictive models is useful for clinical applications with high…

Machine Learning · Computer Science 2023-05-09 Amin Nayebi , Sindhu Tipirneni , Chandan K Reddy , Brandon Foreman , Vignesh Subbian

Xsuite is a newly developed modular simulation package combining in a single flexible and modern framework the capabilities of different tools developed at CERN in the past decades, notably Sixtrack, Sixtracklib, COMBI and PyHEADTAIL. The…

This paper introduces the MIP Platform architecture model, a novel AI-based cognitive computing platform architecture. The goal of the proposed application of MIP is to reduce the implementation burden for the usage of AI algorithms applied…

Distributed, Parallel, and Cluster Computing · Computer Science 2020-03-31 Pasquale Giampa , Massimiliano Dibitonto

Discrete Event Simulation is a widely used technique that is used to model and analyze complex systems in many fields of science and engineering. The increasingly large size of simulation models poses a serious computational challenge,…

Distributed, Parallel, and Cluster Computing · Computer Science 2016-12-30 Gabriele D'Angelo , Stefano Ferretti , Moreno Marzolla , Lorenzo Armaroli

Ensemble learning is a well established body of methods for machine learning to enhance predictive performance by combining multiple algorithms/models. Combinatorial Fusion Analysis (CFA) has provided method and practice for combining…

Machine Learning · Computer Science 2026-03-12 Eric Roginek , Jingyan Xu , D. Frank. Hsu

The ability to estimate epistemic uncertainty is often crucial when deploying machine learning in the real world, but modern methods often produce overconfident, uncalibrated uncertainty predictions. A common approach to quantify epistemic…

Nonlinear differential equations rarely admit closed-form solutions, thus requiring numerical time-stepping algorithms to approximate solutions. Further, many systems characterized by multiscale physics exhibit dynamics over a vast range of…

Machine Learning · Computer Science 2020-08-26 Yuying Liu , J. Nathan Kutz , Steven L. Brunton

Mixed-Integer Linear Programming (MILP) is a foundational tool for complex decision-making problems. However, the NP-hard nature of MILP presents a significant computational challenge, motivating the development of machine learning-based…

Optimization and Control · Mathematics 2026-03-03 Hongpei Li , Hui Yuan , Han Zhang , Jianghao Lin , Dongdong Ge , Mengdi Wang , Yinyu Ye