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Related papers: A hybrid Green-Kubo (hGK) framework for calculatin…

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The Green-Kubo (GK) method is a rigorous framework for heat transport simulations in materials. However, it requires an accurate description of the potential-energy surface and carefully converged statistics. Machine-learning potentials can…

Materials Science · Physics 2023-10-12 Marcel F. Langer , Florian Knoop , Christian Carbogno , Matthias Scheffler , Matthias Rupp

Solid-liquid friction plays a key role in nanofluidic systems. Yet, despite decades of method development to quantify solid-liquid friction using molecular dynamics (MD) simulations, an accurate and widely applicable method is still…

Chemical Physics · Physics 2023-07-26 Haruki Oga , Takeshi Omori , Laurent Joly , Yasutaka Yamaguchi

Viscosity, a fundamental transport and rheological property of liquids, quantifies the resistance to relative motion between molecular layers and plays a critical role in understanding material behavior. Conventional methods, such as the…

Soft Condensed Matter · Physics 2025-07-18 Ankit Singh , Vinay Vaibhav , Alessio Zaccone

This paper introduces a high order numerical framework for efficient and robust simulation of compressible flows. To address the inefficiencies of standard hybridized discontinuous Galerkin (HDG) methods in large scale settings, we develop…

Computational Engineering, Finance, and Science · Computer Science 2025-07-31 Vahid Badrkhani , Marco F. P. ten Eikelder , Dominik Schillinger

A central aim of statistical mechanics is to establish connections between a system's microscopic fluctuations and its macroscopic response to a perturbation. For non-equilibrium transport properties, this amounts to establishing Green-Kubo…

Statistical Mechanics · Physics 2024-11-28 Anna T. Bui , Stephen J. Cox

Equilibrium molecular dynamics simulations, in combination with the Green-Kubo (GK) method, have been extensively used to compute the thermal conductivity of liquids. However, the GK method relies on an ambiguous definition of the…

Computational Physics · Physics 2020-09-30 Bingqing Cheng , Daan Frenkel

Viscoelastic properties of polymer melts are particularly challenging to compute due to the intrinsic stress fluctuations in molecular dynamics (MD). We compared equilibrium and non-equilibrium MD approaches for extracting the storage (G')…

Soft Condensed Matter · Physics 2022-05-14 Oluseye Adeyemi , Shiping Zhu , Li Xi

In this paper, we present an hp-adaptive hybrid Discontinuous Galerkin/Finite Volume method for simulating compressible, turbulent multi-component flows. Building on a previously established hp-adaptive strategy for hyperbolic gas- and…

The high-order numerical solution of the non-linear shallow water equations (and of hyperbolic systems in general) is susceptible to unphysical Gibbs oscillations that form in the proximity of strong gradients. The solution to this problem…

Numerical Analysis · Mathematics 2016-07-18 Simone Marras , Michal A. Kopera , Emil M. Constantinescu , Jenny Suckale , Francis X. Giraldo

Viscosity is a fundamental property of liquid lubricants, yet it is challenging to determine accurately, especially at high pressures. Although equilibrium molecular dynamics (EMD) simulations are a promising alternative to…

Computational Physics · Physics 2026-03-13 Gözdenur Toraman , Dieter Fauconnier , Toon Verstraelen

With the advent of high-performance computing techniques, the data for analysis has grown significantly. Here, graphic processing unit (GPU) based program kernels are discussed to exploit parallelism in the analysis codes specific to…

Computational Physics · Physics 2018-11-07 Gourav Shrivastav , Manish Agarwal

We present a comparison between hybridized and non-hybridized discontinuous Galerkin methods in the context of target-based hp-adaptation for compressible flow problems. The aim is to provide a critical assessment of the computational…

Computational Engineering, Finance, and Science · Computer Science 2014-11-12 Michael Woopen , Aravind Balan , Georg May , Jochen Schütz

We have developed a Green-Kubo relation that enables accurate calculations of friction at solid-liquid interfaces directly from equilibrium molecular dynamics (MD) simulations and that provides a pathway to bypass the time-scale limitations…

Statistical Mechanics · Physics 2016-08-08 Kai Huang , Izabela Szlufarska

The gas-kinetic scheme (GKS) provides high computational efficiency and accuracy for continuum flow simulations but is unable to reliably capture rarefaction effects. In contrast, although the discrete velocity method (DVM) is better suited…

Fluid Dynamics · Physics 2026-05-08 Hangkong Wu , Yuze Zhu , Yajun Zhu , Kun Xu

We report on an extensive study of the viscosity of liquid water at near-ambient conditions, performed within the Green-Kubo theory of linear response and equilibrium ab initio molecular dynamics (AIMD), based on density-functional theory…

Materials Science · Physics 2022-07-05 Cesare Malosso , Linfeng Zhang , Roberto Car , Stefano Baroni , Davide Tisi

We show how to evaluate mobility profiles, characterizing the transport of confined fluids under a perturbation, from equilibrium molecular simulations. The correlation functions derived with the Green-Kubo formalism are difficult to sample…

Chemical Physics · Physics 2020-08-26 Etienne Mangaud , Benjamin Rotenberg

We propose a new discretization method for the Stokes equations. The method is an improved version of the method recently presented in [C. Lehrenfeld, J. Sch\"oberl, Comp. Meth. Appl. Mech. Eng., 361 (2016)] which is based on an…

Numerical Analysis · Mathematics 2018-03-29 Philip L. Lederer , Christoph Lehrenfeld , Joachim Schöberl

We propose IMEX HDG-DG schemes for planar and spherical shallow water systems. Of interest is subcritical flow, where the speed of the gravity wave is faster than that of nonlinear advection. In order to simulate these flows efficiently, we…

Computational Engineering, Finance, and Science · Computer Science 2017-11-09 Shinhoo Kang , Francis X. Giraldo , Tan Bui-Thanh

The Serre-Green-Naghdi (SGN) equations provide a valuable framework for modelling fully nonlinear and weakly dispersive shallow-water flows. However, their elliptic formulation can considerably increase the computational cost compared to…

Numerical Analysis · Mathematics 2025-11-19 Emanuele Macca , Walter Boscheri , Mario Ricchiuto

The purpose of this study is to provide a reproducible framework in the use of the Green-Kubo formalism to extract transport coefficients. More specifically, in the case of shear viscosity, we investigate the limitations and technical…

Nuclear Theory · Physics 2018-07-04 J. -B. Rose , J. M. Torres-Rincon , D. Oliinychenko , A. Schäfer , H. Petersen
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