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We implement and analyse a sparse / indirect-addressing data structure for the Lattice Boltzmann Method to support efficient compute kernels for fluid dynamics problems with a high number of non-fluid nodes in the domain, such as in porous…

Distributed, Parallel, and Cluster Computing · Computer Science 2024-08-14 Philipp Suffa , Markus Holzer , Harald Köstler , Ulrich Rüde

Matrix Factorization (MF) on large scale matrices is computationally as well as memory intensive task. Alternative convergence techniques are needed when the size of the input matrix is higher than the available memory on a Central…

Machine Learning · Computer Science 2019-01-21 Prasad G Bhavana , Vineet C Nair

Sparse data structures are commonly used in neural networks to reduce the memory footprint. These data structures are compact but cause irregularities such as random memory accesses, which prevent efficient use of the memory hierarchy. GPUs…

Programming Languages · Computer Science 2025-06-19 Hossein Albakri , Kazem Cheshmi

Learning the "blocking" structure is a central challenge for high dimensional data (e.g., gene expression data). Recently, a sparse singular value decomposition (SVD) has been used as a biclustering tool to achieve this goal. However, this…

Machine Learning · Computer Science 2016-03-22 Wenwen Min , Juan Liu , Shihua Zhang

Block coordinate descent methods and stochastic subgradient methods have been extensively studied in optimization and machine learning. By combining randomized block sampling with stochastic subgradient methods based on dual averaging, we…

Optimization and Control · Mathematics 2015-09-16 Qi Deng , Guanghui Lan , Anand Rangarajan

Block encoding severs as an important data input model in quantum algorithms, enabling quantum computers to simulate non-unitary operators effectively. In this paper, we propose an efficient block-encoding protocol for sparse matrices based…

Quantum Physics · Physics 2025-07-30 Chunlin Yang , Zexian Li , Hongmei Yao , Zhaobing Fan , Guofeng Zhang , Jianshe Liu

A fast algorithm for the approximation of a low rank LU decomposition is presented. In order to achieve a low complexity, the algorithm uses sparse random projections combined with FFT-based random projections. The asymptotic approximation…

Numerical Analysis · Mathematics 2016-01-19 Yariv Aizenbud , Gil Shabat , Amir Averbuch

In many statistical modeling problems, such as classification and regression, it is common to encounter sparse and blocky coefficients. Sparse fused Lasso is specifically designed to recover these sparse and blocky structured features,…

Statistics Theory · Mathematics 2024-05-30 Xiaofei Wu , Rongmei Liang , Zhimin Zhang , Zhenyu Cui

Structured sparsity accelerates training and inference on modern GPUs, yet it still trails unstructured dynamic sparse training (DST) in accuracy. The shortfall stems from a loss of expressivity: whereas a dense layer can realize every…

Machine Learning · Computer Science 2025-10-17 Abhishek Tyagi , Arjun Iyer , Liam Young , William H Renninger , Christopher Kanan , Yuhao Zhu

We present a recursive way to partition hypergraphs which creates and exploits hypergraph geometry and is suitable for many-core parallel architectures. Such partitionings are then used to bring sparse matrices in a recursive Bordered Block…

Data Structures and Algorithms · Computer Science 2011-05-24 B. O. Fagginger Auer , R. H. Bisseling

Sparse training has received an upsurging interest in machine learning due to its tantalizing saving potential for the entire training process as well as inference. Dynamic sparse training (DST), as a leading sparse training approach, can…

Machine Learning · Computer Science 2023-11-13 Lu Yin , Gen Li , Meng Fang , Li Shen , Tianjin Huang , Zhangyang Wang , Vlado Menkovski , Xiaolong Ma , Mykola Pechenizkiy , Shiwei Liu

We introduce a parallel algorithm to construct a preconditioner for solving a large, sparse linear system where the coefficient matrix is a Laplacian matrix (a.k.a., graph Laplacian). Such a linear system arises from applications such as…

Distributed, Parallel, and Cluster Computing · Computer Science 2025-05-30 Tianyu Liang , Chao Chen , Yotam Yaniv , Hengrui Luo , David Tench , Xiaoye S. Li , Aydin Buluc , James Demmel

Many matrices associated with fast transforms posess a certain low-rank property characterized by the existence of several block partitionings of the matrix, where each block is of low rank. Provided that these partitionings are known,…

Numerical Analysis · Mathematics 2023-07-04 Léon Zheng , Gilles Puy , Elisa Riccietti , Patrick Pérez , Rémi Gribonval

Block-tridiagonal systems are prevalent in state estimation and optimal control, and solving these systems is often the computational bottleneck. Improving the underlying solvers therefore has a direct impact on the real-time performance of…

Mathematical Software · Computer Science 2025-12-05 David Jin , Alexis Montoison , Sungho Shin

While existing algorithms may be used to solve a linear system over a general field in matrix-multiplication time, the complexity of constructing a symmetric triangular factorization (LDL) has received relatively little formal study. The…

Numerical Analysis · Mathematics 2025-06-26 Edgar Solomonik

The sparse representation of graphs has shown great potential for accelerating the computation of graph applications (e.g., Social Networks, Knowledge Graphs) on traditional computing architectures (CPU, GPU, or TPU). But the exploration of…

Machine Learning · Computer Science 2024-10-28 Bo Lyu , Shengbo Wang , Shiping Wen , Kaibo Shi , Yin Yang , Lingfang Zeng , Tingwen Huang

In inverting large sparse matrices, the key difficulty lies in effectively exploiting sparsity during the inversion process. One well-established strategy is the nested dissection, which seeks the so-called sparse Cholesky factorization. We…

Numerical Analysis · Mathematics 2025-05-14 Michał Kos , Krzysztof Podgórski , Hanqing Wu

Distributed sparse block codes (SBCs) exhibit compact representations for encoding and manipulating symbolic data structures using fixed-width vectors. One major challenge however is to disentangle, or factorize, the distributed…

Computer Vision and Pattern Recognition · Computer Science 2024-05-29 Michael Hersche , Aleksandar Terzic , Geethan Karunaratne , Jovin Langenegger , Angéline Pouget , Giovanni Cherubini , Luca Benini , Abu Sebastian , Abbas Rahimi

This manuscript describes a technique for computing partial rank-revealing factorizations, such as, e.g, a partial QR factorization or a partial singular value decomposition. The method takes as input a tolerance $\varepsilon$ and an…

Numerical Analysis · Mathematics 2015-06-19 Per-Gunnar Martinsson , Sergey Voronin

We present new refinement heuristics for the balanced graph partitioning problem that break with an age-old rule. Traditionally, local search only permits moves that keep the block sizes balanced (below a size constraint). In this work, we…

Social and Information Networks · Computer Science 2025-05-13 Nikolai Maas , Lars Gottesbüren , Daniel Seemaier