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Vessel dynamics simulation is vital in studying the relationship between geometry and vascular disease progression. Reliable dynamics simulation relies on high-quality vascular meshes. Most of the existing mesh generation methods highly…

Image and Video Processing · Electrical Eng. & Systems 2024-12-03 Dengqiang Jia , Xinnian Yang , Xiaosong Xiong , Shijie Huang , Feiyu Hou , Li Qin , Kaicong Sun , Kannie Wai Yan Chan , Dinggang Shen

The intricate morphology of brain vessels poses significant challenges for automatic segmentation models, which usually focus on a single imaging modality. However, accurately treating brain-related conditions requires a comprehensive…

Computer Vision and Pattern Recognition · Computer Science 2025-10-03 Francesco Galati , Daniele Falcetta , Rosa Cortese , Ferran Prados , Ninon Burgos , Maria A. Zuluaga

Shape graphs are complex geometrical structures commonly found in biological and anatomical systems. A shape graph is a collection of nodes, some connected by curvilinear edges with arbitrary shapes. Their high complexity stems from the…

Computation · Statistics 2024-09-17 Benjamin Beaudett , Anuj Srivastava

Recent advances in 3D imaging technologies provide novel insights to researchers and reveal finer and more detail of examined specimen, especially in the biomedical domain, but also impose huge challenges regarding scalability for automated…

Computer Vision and Pattern Recognition · Computer Science 2021-06-30 Dominik Drees , Aaron Scherzinger , René Hägerling , Friedemann Kiefer , Xiaoyi Jiang

Cardiovascular magnetic resonance (CMR) imaging is a standard imaging modality for assessing cardiovascular diseases (CVDs), the leading cause of death globally. CMR enables accurate quantification of the cardiac chamber volume, ejection…

Neuronal morphology encodes critical information about circuit function, development, and disease, yet current methods analyze topology or graph structure in isolation. We introduce GraPHFormer, a multimodal architecture that unifies these…

Computer Vision and Pattern Recognition · Computer Science 2026-03-24 Uzair Shah , Marco Agus , Mahmoud Gamal , Mahmood Alzubaidi , Corrado Cali , Pierre J. Magistretti , Abdesselam Bouzerdoum , Mowafa Househ

Biological neural networks define the brain function and intelligence of humans and other mammals, and form ultra-large, spatial, structured graphs. Their neuronal organization is closely interconnected with the spatial organization of the…

Patient-specific computational modeling has emerged as a powerful tool for surgical planning in complex congenital heart disease. One promising application is complex biventricular repair, which often requires construction of a custom…

Computational Engineering, Finance, and Science · Computer Science 2026-03-27 Elena Sabdy Martinez , Alexander D. Kaiser , Alexander K. Reed , Sascha W. Stocker , Amit Sharir , Perry S. Choi , Shiraz A. Maskatia , Michael R. Ma , Alison Lesly Marsden

The influence of sex and age on cerebral perfusion is recognized, but the specific impacts on regional cerebral blood flow (CBF) and vascular risk remain to be fully characterized. In this study, 3D pseudo-continuous arterial spin labeling…

Image and Video Processing · Electrical Eng. & Systems 2025-08-22 Sneha Noble , Neelam Sinha , Vaanathi Sundareshan , Thomas Gregor Issac

Accurately restoring topology is both challenging and crucial in tubular structure extraction tasks, such as blood vessel segmentation and road network extraction. Diverging from traditional approaches based on pixel-level classification,…

Computer Vision and Pattern Recognition · Computer Science 2025-02-18 Zhao Zhang , Ziwei Zhao , Dong Wang , Liwei Wang

We hereby present a full synthetic model, able to mimic the various constituents of the cerebral vascular tree: the cerebral arteries, the bifurcations and the intracranial aneurysms. By building this model, our goal was to provide a…

Image and Video Processing · Electrical Eng. & Systems 2024-03-28 Rafic Nader , Florent Autrusseau , Vincent L'Allinec , Romain Bourcier

Accurate automated extraction of brain vessel centerlines from CTA images plays an important role in diagnosis and therapy of cerebrovascular diseases, such as stroke. However, this task remains challenging due to the complex…

Image and Video Processing · Electrical Eng. & Systems 2024-01-17 Sijie Liu , Ruisheng Su , Jianghang Su , Jingmin Xin , Jiayi Wu , Wim van Zwam , Pieter Jan van Doormaal , Aad van der Lugt , Wiro J. Niessen , Nanning Zheng , Theo van Walsum

Automated detection of curvilinear structures, e.g., blood vessels or nerve fibres, from medical and biomedical images is a crucial early step in automatic image interpretation associated to the management of many diseases. Precise…

Image and Video Processing · Electrical Eng. & Systems 2020-10-20 Lei Mou , Yitian Zhao , Huazhu Fu , Yonghuai Liu , Jun Cheng , Yalin Zheng , Pan Su , Jianlong Yang , Li Chen , Alejandro F Frang , Masahiro Akiba , Jiang Liu

Coronary artery extraction is a crucial prerequisite for computer-aided diagnosis of coronary artery disease. Accurately extracting the complete coronary tree remains challenging due to several factors, including presence of thin distal…

Image and Video Processing · Electrical Eng. & Systems 2025-04-03 Yuehui Qiu , Dandan Shan , Yining Wang , Pei Dong , Dijia Wu , Xinnian Yang , Qingqi Hong , Dinggang Shen

Topological and geometrical analysis of retinal blood vessel is a cost-effective way for early detection of many common diseases. Meanwhile, automated vessel segmentation and vascular tree analysis are still lacking in terms of…

Image and Video Processing · Electrical Eng. & Systems 2021-11-24 Xingzheng Lyu , Li Cheng , Sanyuan Zhang

Vasculature is known to be of key biological significance, especially in the study of cancer. As such, considerable effort has been focused on the automated measurement and analysis of vasculature in medical and pre-clinical images. In…

Computer Vision and Pattern Recognition · Computer Science 2017-05-29 Russell Bates , Benjamin Irving , Bostjan Markelc , Jakob Kaeppler , Ruth Muschel , Vicente Grau , Julia A. Schnabel

Intracranial arteries are critical blood vessels that supply the brain with oxygenated blood. Intracranial artery labels provide valuable guidance and navigation to numerous clinical applications and disease diagnoses. Various machine…

Image and Video Processing · Electrical Eng. & Systems 2022-11-02 Yaxin Zhu , Peisheng Qian , Ziyuan Zhao , Zeng Zeng

Systemic diseases such as diabetes, hypertension, atherosclerosis are among the leading causes of annual human mortality rate. It is suggested that retinal and conjunctival vascular tortuosity is a potential biomarker for such systemic…

Image and Video Processing · Electrical Eng. & Systems 2021-01-05 Ashwin De Silva , Malsha V. Perera , Navodini Wijethilake , Saroj Jayasinghe , Nuwan D. Nanayakkara , Anjula De Silva

Past approaches for statistical shape analysis of objects have focused mainly on objects within the same topological classes, e.g., scalar functions, Euclidean curves, or surfaces, etc. For objects that differ in more complex ways, the…

Computer Vision and Pattern Recognition · Computer Science 2020-05-18 Xiaoyang Guo , Anuj Srivastava

Tree-like structures such as retinal images are widely studied in computer-aided diagnosis systems for large-scale screening programs. Despite several segmentation and tracking methods proposed in the literature, there still exist several…

Computer Vision and Pattern Recognition · Computer Science 2017-06-27 Samaneh Abbasi-Sureshjani , Marta Favali , Giovanna Citti , Alessandro Sarti , Bart M. ter Haar Romeny