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Coarse-grained (CG) molecular dynamics (MD) simulations can simulate large molecular complexes over extended timescales by reducing degrees of freedom. A critical step in CG modeling is the selection of the CG mapping algorithm, which…

Soft Condensed Matter · Physics 2025-07-23 Soumya Mondal , Subhanu Halder , Debarchan Basu , Sandeep Kumar , Tarak Karmakar

Motion planning problems can be simplified by admissible projections of the configuration space to sequences of lower-dimensional quotient-spaces, called sequential simplifications. To exploit sequential simplifications, we present the…

Robotics · Computer Science 2019-08-27 Andreas Orthey , Marc Toussaint

The adaptive gradient online learning method known as AdaGrad has seen widespread use in the machine learning community in stochastic and adversarial online learning problems and more recently in deep learning methods. The method's…

Machine Learning · Computer Science 2016-10-05 Nishant A. Mehta , Alistair Rendell , Anish Varghese , Christfried Webers

The efficient solution of large-scale multiterm linear matrix equations is a challenging task in numerical linear algebra, and it is a largely open problem. We propose a new iterative scheme for symmetric and positive definite operators,…

Numerical Analysis · Mathematics 2025-05-27 Davide Palitta , Martina Iannacito , Valeria Simoncini

The geometric high-order regularization methods such as mean curvature and Gaussian curvature, have been intensively studied during the last decades due to their abilities in preserving geometric properties including image edges, corners,…

Image and Video Processing · Electrical Eng. & Systems 2023-03-22 Zhenwei Zhang , Ke Chen , Ke Tang , Yuping Duan

Space is a circuit oriented, spatial programming language designed to exploit the massive parallelism available in a novel formal model of computation called the Synchronic A-Ram, and physically related FPGA and reconfigurable…

Computation and Language · Computer Science 2010-08-31 Alex V Berka

We propose a unified approach for bottom-up hierarchical image segmentation and object proposal generation for recognition, called Multiscale Combinatorial Grouping (MCG). For this purpose, we first develop a fast normalized cuts algorithm.…

Computer Vision and Pattern Recognition · Computer Science 2016-03-02 Jordi Pont-Tuset , Pablo Arbelaez , Jonathan T. Barron , Ferran Marques , Jitendra Malik

A wide range of (multivariate) temporal (1D) and spatial (2D) data analysis tasks, such as grouping vehicle sensor trajectories, can be formulated as clustering with given metric constraints. Existing metric-constrained clustering…

Machine Learning · Computer Science 2024-06-04 Zhangyu Wang , Gengchen Mai , Krzysztof Janowicz , Ni Lao

In this paper, we propose a new global geometry constraint for depth completion. By assuming depth maps often lay on low dimensional subspaces, a dense depth map can be approximated by a weighted sum of full-resolution principal depth…

Computer Vision and Pattern Recognition · Computer Science 2020-12-03 Yiran Zhong , Yuchao Dai , Hongdong Li

Efficient and real time segmentation of color images has a variety of importance in many fields of computer vision such as image compression, medical imaging, mapping and autonomous navigation. Being one of the most computationally…

Computer Vision and Pattern Recognition · Computer Science 2017-10-09 Roopal Nahar , Akanksha Baranwal , K. Madhava Krishna

Approximate matrix multiplication with limited space has received ever-increasing attention due to the emergence of large-scale applications. Recently, based on a popular matrix sketching algorithm -- frequent directions, previous work has…

Machine Learning · Computer Science 2024-06-25 Yuanyu Wan , Lijun Zhang

We introduce COBRA (Cosmology with Optimally factorized Bases of Radial Approximants), a novel framework for rapid computation of large-scale structure observables. COBRA separates scale dependence from cosmological parameters in the linear…

Cosmology and Nongalactic Astrophysics · Physics 2025-04-15 Thomas Bakx , Nora Elisa Chisari , Zvonimir Vlah

Graph matching aims to find correspondences between two graphs. This paper integrates several well-known graph matching algorithms into a framework: the constrained gradient method. The primary difference among these algorithms lies in…

Combinatorics · Mathematics 2024-12-11 Binrui Shen , Qiang Niu , Shengxin Zhu

Structural decomposition methods offer powerful theoretical guarantees for join evaluation, yet they are rarely used in real-world query optimizers. A major reason is the difficulty of combining cost-based plan search and structure-based…

Databases · Computer Science 2026-03-17 Zhekai Jiang , Qichen Wang , Christoph Koch

Variables in many massive high-dimensional data sets are structured, arising for example from measurements on a regular grid as in imaging and time series or from spatial-temporal measurements as in climate studies. Classical multivariate…

Methodology · Statistics 2012-03-14 Genevera I. Allen , Logan Grosenick , Jonathan Taylor

Sparse matrix-vector multiplication (SpMV) is a fundamental operation in machine learning, scientific computing, and graph algorithms. In this paper, we investigate the space, time, and energy efficiency of SpMV using various compressed…

Data Structures and Algorithms · Computer Science 2024-09-30 Francesco Tosoni , Philip Bille , Valerio Brunacci , Alessio De Angelis , Paolo Ferragina , Giovanni Manzini

Stereo depth estimation is used for many computer vision applications. Though many popular methods strive solely for depth quality, for real-time mobile applications (e.g. prosthetic glasses or micro-UAVs), speed and power efficiency are…

Image and Video Processing · Electrical Eng. & Systems 2019-08-09 Oscar Rahnama , Tommaso Cavallari , Stuart Golodetz , Simon Walker , Philip H. S. Torr

Streaming graphs are drawing increasing attention in both academic and industrial communities as many graphs in real applications evolve over time. Continuous subgraph matching (shorted as CSM) aims to report the incremental matches of a…

Data Structures and Algorithms · Computer Science 2023-04-26 Rongjian Yang , Zhijie Zhang , Weiguo Zheng , Jeffery Xu Yu

GraphRAG integrates (knowledge) graphs with large language models (LLMs) to improve reasoning accuracy and contextual relevance. Despite its promising applications and strong relevance to multiple research communities, such as databases and…

Artificial Intelligence · Computer Science 2025-08-20 Yukun Cao , Zengyi Gao , Zhiyang Li , Xike Xie , S. Kevin Zhou , Jianliang Xu

Advances in single-cell sequencing have enabled high-resolution profiling of diverse molecular modalities, while integrating unpaired multi-omics single-cell data remains challenging. Existing approaches either rely on pair information or…

Quantitative Methods · Quantitative Biology 2026-01-21 Jianle Sun , Chaoqi Liang , Ran Wei , Peng Zheng , Lei Bai , Wanli Ouyang , Hongliang Yan , Peng Ye
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