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Microarray technology is still an important way to assess gene expression in molecular biology, mainly because it measures expression profiles for thousands of genes simultaneously, what makes this technology a good option for some studies…

Computation · Statistics 2015-11-12 Gustavo H. Esteves , Roberto Hirata

Physics-informed machine learning (PIML) integrates prior physical information, often in the form of differential equation constraints, into the process of fitting machine learning models to physical data. Popular PIML approaches, including…

Machine Learning · Statistics 2025-10-31 Mara Daniels , Liam Hodgkinson , Michael Mahoney

This paper presents `chipfiring`, a comprehensive Python package for the mathematical analysis of chip-firing games on finite graphs. The package provides a robust toolkit for defining graphs and chip configurations (divisors), performing…

Combinatorics · Mathematics 2025-08-05 Dhyey Dharmendrakumar Mavani , Tairan Ji , Nathan Pflueger

Dealing with uncertainty in applications of machine learning to real-life data critically depends on the knowledge of intrinsic dimensionality (ID). A number of methods have been suggested for the purpose of estimating ID, but no standard…

Machine Learning · Computer Science 2023-12-07 Jonathan Bac , Evgeny M. Mirkes , Alexander N. Gorban , Ivan Tyukin , Andrei Zinovyev

We propose a novel framework to classify large-scale time series data with long duration. Long time seriesclassification (L-TSC) is a challenging problem because the dataoften contains a large amount of irrelevant information to…

Artificial Intelligence · Computer Science 2021-11-23 Yuansheng Zhu , Weishi Shi , Deep Shankar Pandey , Yang Liu , Xiaofan Que , Daniel E. Krutz , Qi Yu

Over the past few decades, neuroscience experiments have become increasingly complex and naturalistic. Experimental design has in turn become more challenging, as experiments must conform to an ever-increasing diversity of design…

Neurons and Cognition · Quantitative Biology 2020-12-07 Storm Slivkoff , Jack L. Gallant

Machine Learning Interatomic Potentials (MLIP) are a novel in silico approach for molecular property prediction, creating an alternative to disrupt the accuracy/speed trade-off of empirical force fields and density functional theory (DFT).…

In this paper, we investigate the constraint typology of mixed-integer linear programming MILP formulations. MILP is a commonly used mathematical programming technique for modelling and solving real-life scheduling, routing, planning,…

Artificial Intelligence · Computer Science 2021-03-02 Vicky Mak-Hau , John Yearwood , William Moran

The democratization of Data Mining has been widely successful thanks in part to powerful and easy-to-use Machine Learning libraries. These libraries have been particularly tailored to tackle Supervised Learning. However, strong supervision…

Machine Learning · Computer Science 2023-08-21 Pierre Nodet , Vincent Lemaire , Alexis Bondu , Antoine Cornuéjols

The detection of induced pluripotent stem cell (iPSC) colonies often needs the precise extraction of the colony features. However, existing computerized systems relied on segmentation of contours by preprocessing for classifying the colony…

Image and Video Processing · Electrical Eng. & Systems 2022-03-10 Novanto Yudistira , Muthu Subash Kavitha , Jeny Rajan , Takio Kurita

imbalanced-ensemble, abbreviated as imbens, is an open-source Python toolbox for leveraging the power of ensemble learning to address the class imbalance problem. It provides standard implementations of popular ensemble imbalanced learning…

Machine Learning · Computer Science 2023-02-24 Zhining Liu , Jian Kang , Hanghang Tong , Yi Chang

We are interested in the application of Machine Learning (ML) technology to improve mathematical software. It may seem that the probabilistic nature of ML tools would invalidate the exact results prized by such software, however, the…

Symbolic Computation · Computer Science 2020-09-10 Dorian Florescu , Matthew England

Machine learning models have become integral to many fields, but their reliability, defined as producing dependable, trustworthy, and domain-consistent predictions, remains a critical concern. Multiple Instance Learning (MIL) models…

Computer Vision and Pattern Recognition · Computer Science 2025-12-10 Hassan Keshvarikhojasteh , Marc Aubreville , Christof A. Bertram , Josien P. W. Pluim , Mitko Veta

We describe a novel weakly supervised deep learning framework that combines both the discriminative and generative models to learn meaningful representation in the multiple instance learning (MIL) setting. MIL is a weakly supervised…

Machine Learning · Computer Science 2018-07-09 Shabnam Ghaffarzadegan

This paper introduces a new Python package specifically designed to address calibration of probabilistic classifiers under dataset shift. The method is demonstrated in binary and multi-class settings and its effectiveness is measured…

Machine Learning · Computer Science 2025-09-16 Ivan Petej

In the domain of vehicle telematics the automated recognition of driving maneuvers is used to classify and evaluate driving behaviour. This not only serves as a component to enhance the personalization of insurance policies, but also to…

Machine Learning · Computer Science 2025-07-01 Jonathan Schuster , Fabian Transchel

mmid (Multi-Modal Integration and Downstream analyses for healthcare analytics) is a Python package that offers multi-modal fusion and imputation, classification, time-to-event prediction and clustering functionalities under a single…

MIML library is a Java software tool to develop, test, and compare classification algorithms for multi-instance multi-label (MIML) learning. The library includes 43 algorithms and provides a specific format and facilities for data managing…

Machine Learning · Computer Science 2024-02-14 Álvaro Belmonte , Amelia Zafra , Eva Gibaja

This applied research article explores the application of Mixed-Integer Linear Programming (MILP) to address line-balancing challenges in the garment industry, focusing on optimizing production processes under multiple constraints. By…

Optimization and Control · Mathematics 2025-04-10 Ray Wai Man Kong , Ding Ning , Theodore Ho Tin Kong

Leveraging machine learning (ML) to predict an initial solution for mixed-integer linear programming (MILP) has gained considerable popularity in recent years. These methods predict a solution and fix a subset of variables to reduce the…

Machine Learning · Computer Science 2025-03-04 Haoyang Liu , Jie Wang , Zijie Geng , Xijun Li , Yuxuan Zong , Fangzhou Zhu , Jianye Hao , Feng Wu