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Deep learning-based AI models have been extensively applied in genomics, achieving remarkable success across diverse applications. As these models gain prominence, there exists an urgent need for interpretability methods to establish…

Genomics · Quantitative Biology 2025-05-16 Chenyu Wang , Chaoying Zuo , Zihan Su , Yuhang Xing , Lu Li , Maojun Wang , Zeyu Zhang

Explainability for Large Language Models (LLMs) is a critical yet challenging aspect of natural language processing. As LLMs are increasingly integral to diverse applications, their "black-box" nature sparks significant concerns regarding…

Computation and Language · Computer Science 2024-02-23 Haoyan Luo , Lucia Specia

Large language models (LLMs) have become central to modern AI workflows, powering applications from open-ended text generation to complex agent-based reasoning. However, debugging these models remains a persistent challenge due to their…

Transformers have been shown to be able to perform deductive reasoning on a logical rulebase containing rules and statements written in English natural language. While the progress is promising, it is currently unclear if these models…

Computation and Language · Computer Science 2022-11-09 Soumya Sanyal , Zeyi Liao , Xiang Ren

Large Language Models (LLMs) demonstrate the ability to solve reasoning and mathematical problems using the Chain-of-Thought (CoT) technique. Expanding CoT length, as seen in models such as DeepSeek-R1, significantly enhances this reasoning…

Computation and Language · Computer Science 2025-07-15 Zihao Li , Xu Wang , Yuzhe Yang , Ziyu Yao , Haoyi Xiong , Mengnan Du

Large Language Models (LLMs) have demonstrated impressive progress in complex reasoning tasks, largely driven by the Chain-of-Thought (CoT) paradigm, which decomposes difficult problems into intermediate steps. However, CoT reasoning…

Symbolic Computation · Computer Science 2026-05-26 Rui Wang , Zeming Wei , Yihao Zhang , Xiaokun Luan

Understanding how the human brain progresses from processing simple linguistic inputs to performing high-level reasoning is a fundamental challenge in neuroscience. While modern large language models (LLMs) are increasingly used to model…

Computation and Language · Computer Science 2026-01-27 Linyang He , Tianjun Zhong , Richard Antonello , Gavin Mischler , Micah Goldblum , Nima Mesgarani

Large language models (LLMs) are increasingly used in situations where human values are at stake, such as decision-making tasks that involve reasoning when performed by humans. We investigate the so-called reasoning capabilities of LLMs…

Computation and Language · Computer Science 2025-12-25 Nathaniël de Leeuw , Marceau Nahon , Mathis Reymond , Raja Chatila , Mehdi Khamassi

Recently, with the chain of thought (CoT) prompting, large language models (LLMs), e.g., GPT-3, have shown strong reasoning ability in several natural language processing tasks such as arithmetic, commonsense, and logical reasoning.…

Artificial Intelligence · Computer Science 2023-10-20 Yixuan Weng , Minjun Zhu , Fei Xia , Bin Li , Shizhu He , Shengping Liu , Bin Sun , Kang Liu , Jun Zhao

This work presents a novel systematic methodology to analyse the capabilities and limitations of Large Language Models (LLMs) with feedback from a formal inference engine, on logic theory induction. The analysis is complexity-graded w.r.t.…

Computation and Language · Computer Science 2025-01-15 João Pedro Gandarela , Danilo S. Carvalho , André Freitas

Reasoning is a fundamental aspect of human intelligence that plays a crucial role in activities such as problem solving, decision making, and critical thinking. In recent years, large language models (LLMs) have made significant progress in…

Computation and Language · Computer Science 2023-05-29 Jie Huang , Kevin Chen-Chuan Chang

Recent advances in large language models (LLMs) have popularized the chain-of-thought (CoT) paradigm, in which models produce explicit reasoning steps in natural language. Although this approach improves interpretability and facilitates…

Computation and Language · Computer Science 2025-03-03 José I. Orlicki

Unsupervised methods are widely used to induce latent semantic structure from large text collections, yet their outputs often contain incoherent, redundant, or poorly grounded clusters that are difficult to validate without labeled data. We…

Computation and Language · Computer Science 2026-04-21 Tunazzina Islam

Deepfake detection remains a critical challenge in the era of advanced generative models, particularly as synthetic media becomes more sophisticated. In this study, we explore the potential of state of the art multi-modal (reasoning) large…

Computer Vision and Pattern Recognition · Computer Science 2025-04-01 Simiao Ren , Yao Yao , Kidus Zewde , Zisheng Liang , Tsang , Ng , Ning-Yau Cheng , Xiaoou Zhan , Qinzhe Liu , Yifei Chen , Hengwei Xu

The success of pre-trained contextualized representations has prompted researchers to analyze them for the presence of linguistic information. Indeed, it is natural to assume that these pre-trained representations do encode some level of…

Computation and Language · Computer Science 2025-08-08 Karolina Stańczak , Lucas Torroba Hennigen , Adina Williams , Ryan Cotterell , Isabelle Augenstein

Deep learning has recently demonstrated state-of-the art performance on key tasks related to the maintenance of computer systems, such as intrusion detection, denial of service attack detection, hardware and software system failures, and…

Machine Learning · Computer Science 2018-03-15 Andy Brown , Aaron Tuor , Brian Hutchinson , Nicole Nichols

Understanding why machine learning models behave the way they do empowers both system designers and end-users in many ways: in model selection, feature engineering, in order to trust and act upon the predictions, and in more intuitive user…

Machine Learning · Statistics 2016-06-20 Marco Tulio Ribeiro , Sameer Singh , Carlos Guestrin

This paper assesses the ability of large language models (LLMs) to translate texts that include inter-sentential dependencies. We use the English-French DiscEvalMT benchmark (Bawden et al., 2018) with pairs of sentences containing…

Computation and Language · Computer Science 2026-03-09 Shabnam Ataee , Hugo Huart , Andrei Popescu-Belis

Large language models (LLMs) have demonstrated impressive capabilities in natural language processing. However, their internal mechanisms are still unclear and this lack of transparency poses unwanted risks for downstream applications.…

Computation and Language · Computer Science 2023-11-30 Haiyan Zhao , Hanjie Chen , Fan Yang , Ninghao Liu , Huiqi Deng , Hengyi Cai , Shuaiqiang Wang , Dawei Yin , Mengnan Du

Large language models (LLMs) like ChatGPT have shown significant advancements across diverse natural language understanding (NLU) tasks, including intelligent dialogue and autonomous agents. Yet, lacking widely acknowledged testing…

Computation and Language · Computer Science 2024-05-10 Jinyang Wu , Feihu Che , Xinxin Zheng , Shuai Zhang , Ruihan Jin , Shuai Nie , Pengpeng Shao , Jianhua Tao