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Graph encoder embedding, a recent technique for graph data, offers speed and scalability in producing vertex-level representations from binary graphs. In this paper, we extend the applicability of this method to a general graph model, which…

Machine Learning · Statistics 2024-10-24 Cencheng Shen

We are interested in characterizing which classes of finite graphs are well-quasi-ordered by the induced subgraph relation. To that end, we devise an algorithm to decide whether a class of finite graphs well-quasi-ordered by the induced…

Logic in Computer Science · Computer Science 2024-07-02 Aliaume Lopez

Topological metrics of graphs provide a natural way to describe the prominent features of various types of networks. Graph metrics describe the structure and interplay of graph edges and have found applications in many scientific fields. In…

Data Structures and Algorithms · Computer Science 2018-06-21 Loukianos Spyrou , Javier Escudero

An $n\times n$ real matrix $Q$ is quasi-orthogonal if $Q^{\top}Q=qI_{n}$ for some positive real number $q$. If $M$ is a principal sub-matrix of a quasi-orthogonal matrix $Q$, we say that $Q$ is a quasi-orthogonal extension of $M$. In a…

Combinatorics · Mathematics 2024-12-16 Abderrahim Boussaïri , Brahim Chergui , Zaineb Sarir , Mohamed Zouagui

We propose a novel subgraph image representation for classification of network fragments with the targets being their parent networks. The graph image representation is based on 2D image embeddings of adjacency matrices. We use this image…

Computer Vision and Pattern Recognition · Computer Science 2018-04-18 Kshiteesh Hegde , Malik Magdon-Ismail , Ram Ramanathan , Bishal Thapa

We introduce block-tree graphs as a framework for deriving efficient algorithms on graphical models. We define block-tree graphs as a tree-structured graph where each node is a cluster of nodes such that the clusters in the graph are…

Machine Learning · Statistics 2010-11-16 Divyanshu Vats , Jose M. F. Moura

Graph embedding is a powerful method in parallel computing that maps a guest network $G$ into a host network $H$. The performance of an embedding can be evaluated by certain parameters, such as the dilation, the edge congestion and the…

The inductive biases of graph representation learning algorithms are often encoded in the background geometry of their embedding space. In this paper, we show that general directed graphs can be effectively represented by an embedding model…

Machine Learning · Statistics 2021-06-17 Aaron Sim , Maciej Wiatrak , Angus Brayne , Páidí Creed , Saee Paliwal

We prove that there is $c>0$ such that for all sufficiently large $n$, if $T_1,\dots,T_n$ are any trees such that $T_i$ has $i$ vertices and maximum degree at most $cn/\log n$, then $\{T_1,\dots,T_n\}$ packs into $K_n$. Our main result…

Combinatorics · Mathematics 2022-06-22 Peter Allen , Julia Böttcher , Dennis Clemens , Jan Hladký , Diana Piguet , Anusch Taraz

Quasi-isometries are mappings on graphs, with distance-distortions parameterized by a multiplicative factor and an additive constant. The distance-distortions of quasi-isometries are in a general form that captures a wide range of…

Data Structures and Algorithms · Computer Science 2022-08-22 Khí-Uí Soo , Bakhadyr Khoussainov , Simone Linz

In this note, we show that locally finite quasi-transitive graphs are quasi-isometric to trees if and only if every other locally finite quasi-transitive graph quasi-isometric to them is minor excluded. This generalizes results by…

Combinatorics · Mathematics 2021-10-26 Matthias Hamann

Lying at the interface between Network Science and Machine Learning, node embedding algorithms take a graph as input and encode its structure onto output vectors that represent nodes in an abstract geometric space, enabling various…

Physics and Society · Physics 2025-10-03 Riccardo Milocco , Fabian Jansen , Diego Garlaschelli

Let $C^*(E)$ be the graph $C^*$-algebra associated to a graph E and let J be a gauge invariant ideal in $C^*(E)$. We compute the cyclic six-term exact sequence in $K$-theory of the associated extension in terms of the adjacency matrix…

Operator Algebras · Mathematics 2012-11-20 Toke M. Carlsen , Søren Eilers , Mark Tomforde

We investigate the connections between tree amalgamations and quasi-isometries. In particular, we prove that the quasi-isometry type of multi-ended accessible quasi-transitive connected locally finite graphs is determined by the…

Combinatorics · Mathematics 2018-12-13 Matthias Hamann

We extend Edmonds' Branching Theorem to locally finite infinite digraphs. As examples of Oxley or Aharoni and Thomassen show, this cannot be done using ordinary arborescences, whose underlying graphs are trees. Instead we introduce the…

Combinatorics · Mathematics 2020-04-06 J. Pascal Gollin , Karl Heuer

The conception of multi-alphabetical genetics is represented. Matrix forms of the representation of the multi-level system of molecular-genetic alphabets have revealed algebraic properties of this system. These properties are connected with…

Other Quantitative Biology · Quantitative Biology 2013-01-18 Sergey V. Petoukhov

Graph embedding aims at learning a vector-based representation of vertices that incorporates the structure of the graph. This representation then enables inference of graph properties. Existing graph embedding techniques, however, do not…

We propose a neural embedding algorithm called Network Vector, which learns distributed representations of nodes and the entire networks simultaneously. By embedding networks in a low-dimensional space, the algorithm allows us to compare…

Social and Information Networks · Computer Science 2017-09-11 Hao Wu , Kristina Lerman

We introduce and study embeddings of graphs in finite projective planes, and present related results for some families of graphs including complete graphs and complete bipartite graphs. We also make connections between embeddings of graphs…

Combinatorics · Mathematics 2013-10-02 Keith Mellinger , Ryan Vaughn , Oscar Vega

Arrangement graphs were introduced for their connection to computational networks and have since generated considerable interest in the literature. In a pair of recent articles by Chen, Ghorbani and Wong, the eigenvalues for the adjacency…

Representation Theory · Mathematics 2017-08-16 José Araujo , Tim Bratten
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