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Non-negative matrix factorization (NMF) is a powerful tool for dimensionality reduction and clustering. Unfortunately, the interpretation of the clustering results from NMF is difficult, especially for the high-dimensional biological data…

Machine Learning · Computer Science 2021-04-28 Wenwen Min , Taosheng Xu , Xiang Wan , Tsung-Hui Chang

An algorithm is described and tested that carries out a non negative matrix factorization (NMF) ignoring any stretching of the signal along the axis of the independent variable. This extended NMF model is called StretchedNMF. Variability in…

There are two problems need to be dealt with for Non-negative Matrix Factorization (NMF): choose a suitable rank of the factorization and provide a good initialization method for NMF algorithms. This paper aims to solve these two problems…

Machine Learning · Computer Science 2014-10-13 Hanli Qiao

We propose a geometric assumption on nonnegative data matrices such that under this assumption, we are able to provide upper bounds (both deterministic and probabilistic) on the relative error of nonnegative matrix factorization (NMF). The…

Machine Learning · Statistics 2017-08-02 Zhaoqiang Liu , Vincent Y. F. Tan

Due to the iterative nature of most nonnegative matrix factorization (\textsc{NMF}) algorithms, initialization is a key aspect as it significantly influences both the convergence and the final solution obtained. Many initialization schemes…

Numerical Analysis · Computer Science 2019-02-25 Atif Muhammad Syed , Sameer Qazi , Nicolas Gillis

Motivated by the analysis of nonnegative data objects, a novel Nested Nonnegative Cone Analysis (NNCA) approach is proposed to overcome some drawbacks of existing methods. The application of traditional PCA/SVD method to nonnegative data…

Methodology · Statistics 2013-09-09 Lingsong Zhang , J. S. Marron , Shu Lu

Recently, the problem of blind image separation has been widely investigated, especially the medical image denoise which is the main step in medical diag-nosis. Removing the noise without affecting relevant features of the image is the main…

Computer Vision and Pattern Recognition · Computer Science 2018-07-11 R. M. Farouk , M. E. Abd El-aziz , A. M. Adam

Many fundamental problems in data mining can be reduced to one or more NP-hard combinatorial optimization problems. Recent advances in novel technologies such as quantum and quantum-inspired hardware promise a substantial speedup for…

Machine Learning · Computer Science 2022-01-10 Osman Asif Malik , Hayato Ushijima-Mwesigwa , Arnab Roy , Avradip Mandal , Indradeep Ghosh

Recently, many works have demonstrated that Symmetric Non-negative Matrix Factorization~(SymNMF) enjoys a great superiority for various clustering tasks. Although the state-of-the-art algorithms for SymNMF perform well on synthetic data,…

Machine Learning · Computer Science 2022-05-27 Mingjie Li , Hao Kong , Zhouchen Lin

Symmetric nonnegative matrix factorization has found abundant applications in various domains by providing a symmetric low-rank decomposition of nonnegative matrices. In this paper we propose a Frank-Wolfe (FW) solver to optimize the…

Machine Learning · Computer Science 2018-06-27 Han Zhao , Geoff Gordon

Nonnegative matrix factorization (NMF) is a prominent technique for data dimensionality reduction that has been widely used for text mining, computer vision, pattern discovery, and bioinformatics. In this paper, a framework called ARkNLS…

Numerical Analysis · Mathematics 2020-07-14 Delin Chu , Wenya Shi , Srinivas Eswar , Haesun Park

Nonnegative matrix factorization (NMF) under the separability assumption can provably be solved efficiently, even in the presence of noise, and has been shown to be a powerful technique in document classification and hyperspectral unmixing.…

Machine Learning · Statistics 2015-04-02 Nicolas Gillis , Stephen A. Vavasis

In this paper, we develop structure assisted nonnegative matrix factorization (NMF) methods for blind source separation of degenerate data. The motivation originates from nuclear magnetic resonance (NMR) spectroscopy, where a multiple…

Numerical Analysis · Mathematics 2021-03-10 Yuanchang Sun , Kai Huang , Jack Xin

Non-negative Matrix Factorization(NMF) algorithm can only be used to find low rank approximation of original non-negative data while Concept Factorization(CF) algorithm extends matrix factorization to single non-linear kernel space,…

Machine Learning · Computer Science 2024-10-29 Fei Li , Liang Du , Chaohong Ren

The California Innocence Project (CIP), a clinical law school program aiming to free wrongfully convicted prisoners, evaluates thousands of mails containing new requests for assistance and corresponding case files. Processing and…

Non-negative matrix factorization (NMF) minimizes the Euclidean distance between the data matrix and its low rank approximation, and it fails when applied to corrupted data because the loss function is sensitive to outliers. In this paper,…

Machine Learning · Computer Science 2019-06-04 Naiyang Guan , Tongliang Liu , Yangmuzi Zhang , Dacheng Tao , Larry S. Davis

Nowadays, nonnegative matrix factorization (NMF) based methods have been widely applied to blind spectral unmixing. Introducing proper regularizers to NMF is crucial for mathematically constraining the solutions and physically exploiting…

Computer Vision and Pattern Recognition · Computer Science 2020-10-12 Min Zhao , Tiande Gao , Jie Chen , Wei Chen

This study presents a novel integration of unsupervised learning and decision-making strategies for the advanced analysis of 4D-STEM datasets, with a focus on non-negative matrix factorization (NMF) as the primary clustering method. Our…

Machine Learning · Computer Science 2025-11-18 Junhao Cao , Nicolas Folastre , Gozde Oney , Edgar Rauch , Stavros Nicolopoulos , Partha Pratim Das , Arnaud Demortière

Nonnegative matrix factorization (NMF) is the problem of decomposing a given nonnegative $n \times m$ matrix $M$ into a product of a nonnegative $n \times d$ matrix $W$ and a nonnegative $d \times m$ matrix $H$. Restricted NMF requires in…

Formal Languages and Automata Theory · Computer Science 2016-05-24 Dmitry Chistikov , Stefan Kiefer , Ines Marušić , Mahsa Shirmohammadi , James Worrell

Molecular emission from the galactic and extragalactic interstellar medium (ISM) is often used to determine the physical conditions of the dense gas. However, even from spatially resolved regions, the observed molecules are not necessarily…

Astrophysics of Galaxies · Physics 2023-12-21 Damien de Mijolla , Jonathan Holdship , Serena Viti , Johannes Heyl
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