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Software documentation is essential for program comprehension, developer onboarding, code review, and long-term maintenance. Yet producing quality documentation manually is time-consuming and frequently yields incomplete or inconsistent…

Software Engineering · Computer Science 2026-04-20 Afia Farjana , Zaiyu Cheng , Antonio Mastropaolo

As artificial intelligence advances, large language models (LLMs) are entering qualitative research workflows, yet no reproducible methods exist for integrating them into established approaches like thematic analysis (TA), one of the most…

Software Engineering · Computer Science 2025-10-22 Cristina Martinez Montes , Robert Feldt , Cristina Miguel Martos , Sofia Ouhbi , Shweta Premanandan , Daniel Graziotin

Search-based test generators are effective at producing unit tests with high coverage. However, such automatically generated tests have no meaningful test and variable names, making them hard to understand and interpret by developers. On…

Software Engineering · Computer Science 2025-06-12 Matteo Biagiola , Gianluca Ghislotti , Paolo Tonella

Large Language Models (LLMs) have become powerful tools for automated code generation. However, these models often overlook critical security practices, which can result in the generation of insecure code that contains…

Software Engineering · Computer Science 2025-07-01 Hao Yan , Swapneel Suhas Vaidya , Xiaokuan Zhang , Ziyu Yao

As scientific research becomes increasingly complex, innovative tools are needed to manage vast data, facilitate interdisciplinary collaboration, and accelerate discovery. Large language models (LLMs) are now evolving into LLM-based…

Artificial Intelligence · Computer Science 2026-02-03 Shuo Ren , Can Xie , Pu Jian , Zhenjiang Ren , Chunlin Leng , Jiajun Zhang

Despite the dramatic progress in Large Language Model (LLM) development, LLMs often provide seemingly plausible but not factual information, often referred to as hallucinations. Retrieval-augmented LLMs provide a non-parametric approach to…

Computation and Language · Computer Science 2023-11-09 Sai Munikoti , Anurag Acharya , Sridevi Wagle , Sameera Horawalavithana

As AI promises to accelerate scientific discovery, it remains unclear whether fully AI-driven research is possible and whether it can adhere to key scientific values, such as transparency, traceability and verifiability. Mimicking human…

Other Quantitative Biology · Quantitative Biology 2024-04-30 Tal Ifargan , Lukas Hafner , Maor Kern , Ori Alcalay , Roy Kishony

Large language models (LLMs) have shown great potential in automating significant aspects of coding by producing natural code from informal natural language (NL) intent. However, given NL is informal, it does not lend easily to checking…

Software Engineering · Computer Science 2024-10-04 Sarah Fakhoury , Aaditya Naik , Georgios Sakkas , Saikat Chakraborty , Shuvendu K. Lahiri

In recent years, large language models (LLMs) have shown remarkable capabilities in various artificial intelligence problems. However, they fail to plan reliably, even when prompted with a detailed definition of the planning task. Attempts…

Artificial Intelligence · Computer Science 2025-10-27 Augusto B. Corrêa , André G. Pereira , Jendrik Seipp

Although demonstrating remarkable performance on reasoning tasks, Large Language Models (LLMs) still tend to fabricate unreliable responses when confronted with problems that are unsolvable or beyond their capability, severely undermining…

Computation and Language · Computer Science 2025-11-13 Boyang Xue , Qi Zhu , Rui Wang , Sheng Wang , Hongru Wang , Minda Hu , Fei Mi , Yasheng Wang , Lifeng Shang , Qun Liu , Kam-Fai Wong

We develop an iterative assistant we call ChatVis that can synthetically generate Python scripts for data analysis and visualization using a large language model (LLM). The assistant allows a user to specify the operations in natural…

Human-Computer Interaction · Computer Science 2024-10-17 Tanwi Mallick , Orcun Yildiz , David Lenz , Tom Peterka

Large language models (LLMs) are rapidly increasing in capability, but they still struggle with highly specialized programming tasks such as scientific visualization. We present an LLM assistant, ChatVis, that aids the LLM to generate…

Human-Computer Interaction · Computer Science 2025-08-01 Tom Peterka , Tanwi Mallick , Orcun Yildiz , David Lenz , Cory Quammen , Berk Geveci

As large language models (LLMs) evolve into autonomous "AI scientists," they promise transformative advances but introduce novel vulnerabilities, from potential "biosafety risks" to "dangerous explosions." Ensuring trustworthy deployment in…

Cryptography and Security · Computer Science 2026-03-20 Saket Sanjeev Chaturvedi , Joshua Bergerson , Tanwi Mallick

Large Language Models (LLMs) have demonstrated their remarkable capabilities in numerous fields. This survey focuses on how LLMs empower users, regardless of their technical background, to use human languages to automatically generate…

Software Engineering · Computer Science 2025-04-03 Nam Huynh , Beiyu Lin

Large Language Models (LLMs) are transforming scientific hypothesis generation and validation by enabling information synthesis, latent relationship discovery, and reasoning augmentation. This survey provides a structured overview of…

Large language models (LLMs) are increasingly used for high-stakes decision-making, yet existing approaches struggle to reconcile scalability, interpretability, and reproducibility. Black-box models obscure their reasoning, while recent…

Large Language Models (LLMs) are catalyzing a paradigm shift in scientific discovery, evolving from task-specific automation tools into increasingly autonomous agents and fundamentally redefining research processes and human-AI…

Computation and Language · Computer Science 2025-09-18 Tianshi Zheng , Zheye Deng , Hong Ting Tsang , Weiqi Wang , Jiaxin Bai , Zihao Wang , Yangqiu Song

Large Language Models (LLMs) are widely used in software engineering to generate, complete, translate, and fix code, improving developer productivity. While most research focuses on the energy consumption and carbon emissions of model…

Software Engineering · Computer Science 2026-04-15 Sabiya Banu Masthan Ali , Oussema Kirmani , Aroosa Hameed , Syed Muhammad Danish , Gautam Srivastava

LaTeX's precision and flexibility in typesetting have made it the gold standard for the preparation of scientific documentation. Large Language Models (LLMs) present a promising opportunity for researchers to produce publication-ready…

Computation and Language · Computer Science 2025-09-16 Sahil Kale , Vijaykant Nadadur

The integration of Large Language Models (LLMs) into software engineering has revolutionized code generation, enabling unprecedented productivity through promptware and autonomous AI agents. However, this transformation introduces…

Software Engineering · Computer Science 2025-08-19 Satyam Kumar Navneet , Joydeep Chandra