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Persistent (co)homology is a central construction in topological data analysis, where it is used to quantify prominence of features in data to produce stable descriptors suitable for downstream analysis. Persistence is challenging to…

Computational Geometry · Computer Science 2024-10-23 Arnur Nigmetov , Dmitriy Morozov

Persistent homology is a powerful mathematical tool that summarizes useful information about the shape of data allowing one to detect persistent topological features while one adjusts the resolution. However, the computation of such…

Quantum Physics · Physics 2022-03-01 Bernardo Ameneyro , Vasileios Maroulas , George Siopsis

We define notions of differentiability for maps from and to the space of persistence barcodes. Inspired by the theory of diffeological spaces, the proposed framework uses lifts to the space of ordered barcodes, from which derivatives can be…

Algebraic Topology · Mathematics 2021-05-05 Jacob Leygonie , Steve Oudot , Ulrike Tillmann

Symmetry plays a fundamental role in understanding natural phenomena and mathematical structures. This work develops a comprehensive theory for studying the persistent symmetries and degree of asymmetry of finite point configurations over…

Algebraic Topology · Mathematics 2025-08-12 Jian Liu , Dong Chen , Guo-Wei Wei

Persistent homology tracks topological features across geometric scales, encoding birth and death of cycles as barcodes. We develop a complementary theory where the filtration parameter is algebraic precision rather than geometric scale.…

Algebraic Topology · Mathematics 2025-11-04 Robert Ghrist , Cassie Ding

High order networks are weighted hypergraphs col- lecting relationships between elements of tuples, not necessarily pairs. Valid metric distances between high order networks have been defined but they are difficult to compute when the…

Social and Information Networks · Computer Science 2016-05-04 Weiyu Huang , Alejandro Ribeiro

Persistent homology, a powerful mathematical tool for data analysis, summarizes the shape of data through tracking topological features across changes in different scales. Classical algorithms for persistent homology are often constrained…

Quantum Physics · Physics 2024-02-28 Bernardo Ameneyro , George Siopsis , Vasileios Maroulas

One of the primary areas of interest in applied algebraic topology is persistent homology, and, more specifically, the persistence diagram. Persistence diagrams have also become objects of interest in topological data analysis. However,…

Methodology · Statistics 2018-04-06 Eric Berry , Yen-Chi Chen , Jessi Cisewski-Kehe , Brittany Terese Fasy

Computational topologists recently developed a method, called persistent homology to analyze data presented in terms of similarity or dissimilarity. Indeed, persistent homology studies the evolution of topological features in terms of a…

Quantitative Methods · Quantitative Biology 2017-08-01 Pavel Petrov , Stephen T Rush , Zhichun Zhai , Christine H Lee , Peter T Kim , Giseon Heo

Persistent homology is a popular method for computing topological features of (metric) data. Standard approaches based on the \v{C}ech or Rips filtration are stable under small perturbations of the data, but highly sensitive to outliers.…

Algebraic Topology · Mathematics 2026-02-27 Pepijn Roos Hoefgeest , Lucas Slot

We construct "barcodes" for the chain complexes over Novikov rings that arise in Novikov's Morse theory for closed one-forms and in Floer theory on not-necessarily-monotone symplectic manifolds. In the case of classical Morse theory these…

Symplectic Geometry · Mathematics 2017-01-04 Michael Usher , Jun Zhang

In this article we establish two fundamental results for the sublevel set persistent homology for stationary processes indexed by the positive integers. The first is a strong law of large numbers for the persistence diagram (treated as a…

Probability · Mathematics 2025-08-22 Andrew M. Thomas

Recently, persistent homology has had tremendous success in biomolecular data analysis. It works by examining the topological relationship or connectivity of a group of atoms in a molecule at a variety of scales, then rendering a family of…

Biomolecules · Quantitative Biology 2019-03-27 David Bramer , Guo-Wei Wei

Persistent homology enables fast and computable comparison of topological objects. However, it is naturally limited to the analysis of topological spaces. We extend the theory of persistence, by guaranteeing robustness and computability to…

Combinatorics · Mathematics 2020-09-16 Mattia G. Bergomi , Massimo Ferri , Pietro Vertechi , Lorenzo Zuffi

A fundamental tool in topological data analysis is persistent homology, which allows extraction of information from complex datasets in a robust way. Persistent homology assigns a module over a principal ideal domain to a one-parameter…

Algebraic Topology · Mathematics 2019-06-19 Heather A. Harrington , Nina Otter , Hal Schenck , Ulrike Tillmann

Assume that a finite set of points is randomly sampled from a subspace of a metric space. Recent advances in computational topology have provided several approaches to recovering the geometric and topological properties of the underlying…

Algebraic Topology · Mathematics 2021-01-29 Peter Bubenik , Peter T. Kim

Persistent homology (PH) encodes global information, such as cycles, and is thus increasingly integrated into graph neural networks (GNNs). PH methods in GNNs typically traverse an increasing sequence of subgraphs. In this work, we first…

Machine Learning · Computer Science 2026-05-15 Mattie Ji , Indradyumna Roy , Vikas Garg

Classification in the sense of similarity is an important issue. In this paper, we study similarity classification in Topological Data Analysis. We define a pseudometric $d_{S}^{(p)}$ to measure the distance between barcodes generated by…

Algebraic Topology · Mathematics 2024-11-18 Jiaxing He , Bingzhe Hou , Tieru Wu , Yang Cao

Long lived topological features are distinguished from short lived ones (considered as topological noise) in simplicial complexes constructed from complex networks. A new topological invariant, persistent homology, is determined and…

Mathematical Physics · Physics 2009-11-13 Danijela Horak , Slobodan Maletic , Milan Rajkovic

Persistence diagrams are useful displays that give a summary information regarding the topological features of some phenomenon. Usually, only one persistence diagram is available, and replicated persistence diagrams are needed for…

Algebraic Topology · Mathematics 2019-05-16 Sarit Agami