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Graph-level representation learning is the pivotal step for downstream tasks that operate on the whole graph. The most common approach to this problem heretofore is graph pooling, where node features are typically averaged or summed to…

Machine Learning · Computer Science 2022-09-20 Kaixuan Chen , Jie Song , Shunyu Liu , Na Yu , Zunlei Feng , Gengshi Han , Mingli Song

Network embedding has attracted an increasing attention over the past few years. As an effective approach to solve graph mining problems, network embedding aims to learn a low-dimensional feature vector representation for each node of a…

Social and Information Networks · Computer Science 2020-08-10 Xiao Shen , Fu-Lai Chung

Graphs are widely used for representing pairwise interactions in complex systems. Since such real-world graphs are large and often evergrowing, sampling a small representative subgraph is indispensable for various purposes: simulation,…

Social and Information Networks · Computer Science 2022-02-08 Minyoung Choe , Jaemin Yoo , Geon Lee , Woonsung Baek , U Kang , Kijung Shin

Graph clustering aims to divide the graph into different clusters. The recently emerging deep graph clustering approaches are largely built on graph neural networks (GNN). However, GNN is designed for general graph encoding and there is a…

Machine Learning · Computer Science 2025-04-28 Zhiyuan Ning , Zaitian Wang , Ran Zhang , Ping Xu , Kunpeng Liu , Pengyang Wang , Wei Ju , Pengfei Wang , Yuanchun Zhou , Erik Cambria , Chong Chen

Densest subgraph discovery (DSD) is a fundamental problem in graph mining. It has been studied for decades, and is widely used in various areas, including network science, biological analysis, and graph databases. Given a graph G, DSD aims…

Databases · Computer Science 2019-08-08 Yixiang Fang , Kaiqiang Yu , Reynold Cheng , Laks V. S. Lakshmanan , Xuemin Lin

Network embeddings have become very popular in learning effective feature representations of networks. Motivated by the recent successes of embeddings in natural language processing, researchers have tried to find network embeddings in…

Social and Information Networks · Computer Science 2017-02-23 Bijaya Adhikari , Yao Zhang , Naren Ramakrishnan , B. Aditya Prakash

Graph neural networks for heterogeneous graph embedding is to project nodes into a low-dimensional space by exploring the heterogeneity and semantics of the heterogeneous graph. However, on the one hand, most of existing heterogeneous graph…

Machine Learning · Computer Science 2022-12-01 Zezhi Shao , Yongjun Xu , Wei Wei , Fei Wang , Zhao Zhang , Feida Zhu

Graph-based Retrieval-Augmented Generation (GraphRAG) frameworks face a trade-off between the comprehensiveness of global search and the efficiency of local search. Existing methods are often challenged by navigating large-scale…

Information Retrieval · Computer Science 2026-01-30 Yuejie Li , Ke Yang , Tao Wang , Bolin Chen , Bowen Li , Chengjun Mao

Learning the structure of Directed Acyclic Graphs (DAGs) presents a significant challenge due to the vast combinatorial search space of possible graphs, which scales exponentially with the number of nodes. Recent advancements have redefined…

Machine Learning · Computer Science 2024-11-01 Klea Ziu , Slavomír Hanzely , Loka Li , Kun Zhang , Martin Takáč , Dmitry Kamzolov

We consider the problem of constructing embeddings of large attributed graphs and supporting multiple downstream learning tasks. We develop a graph embedding method, which is based on extending deep metric and unbiased contrastive learning…

Machine Learning · Computer Science 2024-11-22 Xiang Li , Gagan Agrawal , Ruoming Jin , Rajiv Ramnath

In the graph domain, deep graph networks based on Message Passing Neural Networks (MPNNs) or Graph Transformers often cause over-smoothing of node features, limiting their expressive capacity. Many upsampling techniques involving node and…

Machine Learning · Computer Science 2026-02-03 Xiaotang Wang , Yun Zhu , Haizhou Shi , Yongchao Liu , Yongqi Zhang

Deep graph generative modeling has proven capable of learning the distribution of complex, multi-scale structures characterizing real-world graphs. However, one of the main limitations of existing methods is their large output space, which…

Machine Learning · Computer Science 2023-06-01 Nathaniel Diamant , Alex M. Tseng , Kangway V. Chuang , Tommaso Biancalani , Gabriele Scalia

Graph Neural Networks (GNNs) have emerged as powerful tools for analyzing and learning representations from graph-structured data. A crucial prerequisite for the outstanding performance of GNNs is the availability of complete graph…

Machine Learning · Computer Science 2024-08-12 Peng Yuan , Peng Tang

An embedding is a mapping from a set of nodes of a network into a real vector space. Embeddings can have various aims like capturing the underlying graph topology and structure, node-to-node relationship, or other relevant information about…

Machine Learning · Computer Science 2023-06-21 Ashkan Dehghan , Kinga Siuta , Agata Skorupka , Andrei Betlen , David Miller , Bogumil Kaminski , Pawel Pralat

In large-scale distributed scenarios, increasingly complex tasks demand more intelligent collaboration across networks, requiring the joint extraction of structural representations from data samples. However, conventional task-specific…

Machine Learning · Computer Science 2026-04-21 Zhuojun Tian , Chaouki Ben Issaid , Mehdi Bennis

Contrastive learning has emerged as a premier method for learning representations with or without supervision. Recent studies have shown its utility in graph representation learning for pre-training. Despite successes, the understanding of…

Machine Learning · Computer Science 2023-02-07 Amur Ghose , Yingxue Zhang , Jianye Hao , Mark Coates

Image guided depth completion aims to recover per-pixel dense depth maps from sparse depth measurements with the help of aligned color images, which has a wide range of applications from robotics to autonomous driving. However, the 3D…

Computer Vision and Pattern Recognition · Computer Science 2022-10-20 Xin Liu , Xiaofei Shao , Bo Wang , Yali Li , Shengjin Wang

Subgraph matching is a fundamental problem in graph analysis with a wide range of applications. However, due to its inherent NP-hardness, enumerating subgraph matches efficiently on large real-world graphs remains highly challenging. Most…

Databases · Computer Science 2026-03-11 Linglin Yang , Xunbin Su , Lei Zou , Xiangyang Gou , Yinnian Lin

Graph representation learning has attracted much attention in supporting high quality candidate search at scale. Despite its effectiveness in learning embedding vectors for objects in the user-item interaction network, the computational…

Information Retrieval · Computer Science 2020-03-05 Qiaoyu Tan , Ninghao Liu , Xing Zhao , Hongxia Yang , Jingren Zhou , Xia Hu

Repetitive DNA (repeats) poses significant challenges for accurate and efficient genome assembly and sequence alignment. This is particularly true for metagenomic data, where genome dynamics such as horizontal gene transfer, gene…

Machine Learning · Computer Science 2024-02-15 Ali Azizpour , Advait Balaji , Todd J. Treangen , Santiago Segarra
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