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We present a novel numerical method aimed to characterize global behaviour, in particular chaotic diffusion, in dynamical systems. It is based on an analysis of the Poincar\'e recurrence statistics on massive grids of initial data or values…

Chaotic Dynamics · Physics 2019-08-27 Ivan I. Shevchenko , Guillaume Rollin , Alexander V. Melnikov , José Lages

We study discrete Laplacians on two-dimensional lattices under modular iterations, focusing on the emergence of nontrivial large-scale patterns. While purely binary or constant modular sequences quickly collapse into strict periodicity, the…

Dynamical Systems · Mathematics 2025-09-09 Małgorzata Nowak-Kępczyk

Bayesian optimisation in the latent space of a Variational AutoEncoder (VAE) is a powerful framework for optimisation tasks over complex structured domains, such as the space of scientifically interesting molecules. However, existing…

Machine Learning · Computer Science 2025-07-08 Henry B. Moss , Sebastian W. Ober , Tom Diethe

Persistent activity is postulated to drive neural network plasticity and learning. To investigate its underlying cellular mechanisms, we developed a biophysically tractable model that explains the emergence, sustenance, and eventual…

Neurons and Cognition · Quantitative Biology 2009-11-13 Vladislav Volman , Richard Gerkin , Pak-Ming Lau , Eshel Ben-Jacob , Guo-Qiang Bi

While one-dimensional cellular automata have been well studied, there are relatively few results about multidimensional cellular automata; the investigation of cellular automata defined on Cayley trees constitutes an intermediate class.…

Dynamical Systems · Mathematics 2017-01-11 Chih-Hung Chang , Jing-Yi Su

We present a method to eliminate redundancy in the transition tables of Boolean automata: schema redescription with two symbols. One symbol is used to capture redundancy of individual input variables, and another to capture permutability in…

Cellular Automata and Lattice Gases · Physics 2015-03-18 Manuel Marques-Pita , Luis M. Rocha

It is well-known that the spacetime diagrams of some cellular automata have a fractal structure: for instance Pascal's triangle modulo 2 generates a Sierpinski triangle. Explaining the fractal structure of the spacetime diagrams of cellular…

Discrete Mathematics · Computer Science 2010-11-02 Johannes Gütschow , Vincent Nesme , Reinhard F. Werner

Delvenne, K\r{u}rka and Blondel have defined new notions of computational complexity for arbitrary symbolic systems, and shown examples of effective systems that are computationally universal in this sense. The notion is defined in terms of…

Dynamical Systems · Mathematics 2014-04-18 Jarkko Kari , Ville Salo , Ilkka Törmä

Boolean networks have been widely used in many areas of science and engineering to represent various dynamical behaviour. In systems biology, they became useful tools to study the dynamical characteristics of large-scale biomolecular…

Dynamical Systems · Mathematics 2024-01-01 Jongrae Kim , Woojeong Lee , Kwang-Hyun Cho

Finite cellular automata (FCA) are widely used in simulating nonlinear complex systems, and their reversibility is closely related to information loss during the evolution. However, only a relatively small portion of their reversibility…

Cellular Automata and Lattice Gases · Physics 2024-11-04 Chen Wang , Junchi Ma , Chao Wang , Defu Lin , Weilin Chen

Substantial efforts have been applied to engineer CA with desired emergent properties, such as supporting gliders. Recent work in continuous CA has generated a wide variety of compelling bioreminiscent patterns, and the expansion of CA…

Neural and Evolutionary Computing · Computer Science 2022-05-25 Q. Tyrell Davis , Josh Bongard

Spontaneous self-replication in cellular automata has long been considered rare, with most known examples requiring careful design or artificial initialization. In this paper, we present formal, causal evidence that such replication can…

Cellular Automata and Lattice Gases · Physics 2025-08-12 Arend Hintze , Clifford Bohm

Recently, it was shown that a rich class of second-order (maximally) superintegrable systems has an underpinning Hesse-Frobenius structure, i.e.\ a Frobenius structure that is compatible with a Hessian structure such that the Hessian…

Mathematical Physics · Physics 2026-05-12 Andreas Vollmer

Arrhythmias are potentially fatal disruptions to the normal heart rhythm, but their underlying dynamics is still poorly understood. Theoretical modeling is an important tool to fill this gap. Typical studies often employ detailed…

Tissues and Organs · Quantitative Biology 2022-03-08 R. V. Stenzinger , M. H. R. Tragtenberg

Classical cellular automata represent a class of explicit discrete spacetime lattice models in which complex large-scale phenomena emerge from simple deterministic rules. With the goal to uncover different physically distinct classes of…

Statistical Mechanics · Physics 2026-05-27 Rustem Sharipov , Matija Koterle , Sašo Grozdanov , Tomaž Prosen

While there has been a keen interest in studying computation at the edge of chaos for dynamical systems undergoing a phase transition, this has come under question for cellular automata. We show that for continuously deformed cellular…

Cellular Automata and Lattice Gases · Physics 2019-04-15 E. Estevez-Rams , D. Estevez-Moya , K. Garcia-Medina , R. Lora-Serrano

What substrate features allow life? We exhaustively classify all 262,144 outer-totalistic binary cellular automata rules with Moore neighbourhood for self-replication and produce phase diagrams in the $(\lambda, F)$ plane, where $\lambda$…

Populations and Evolution · Quantitative Biology 2026-03-27 Don Yin

Cellular automata are fully-discrete, spatially-extended dynamical systems that evolve by simultaneously applying a local update function. Despite their simplicity, the induced global dynamic produces a stunning array of richly-structured,…

Statistical Mechanics · Physics 2019-01-01 Adam Rupe , James P. Crutchfield

Cellular automata can show well known features of quantum mechanics, such as a linear rule according to which they evolve and which resembles a discretized version of the Schroedinger equation. This includes corresponding conservation laws.…

Quantum Physics · Physics 2016-04-25 Hans-Thomas Elze

We study a two-dimensional semi-totalistic binary cell-state cellular automaton, which imitates a reversible precipitation in an abstract chemical medium. The systems exhibits a non-trivial growth and nucleation. We demonstrate how basic…

Cellular Automata and Lattice Gases · Physics 2011-06-16 Genaro Juarez Martinez , Andrew Adamatzky , Ben De Lacy Costello