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Artificial intelligence, trained via machine learning or computational statistics algorithms, holds much promise for the improvement of small molecule drug discovery. However, structure-activity data are high dimensional with low…

Applications · Statistics 2018-07-25 Oliver Watson , Isidro Cortes-Ciriano , Aimee Taylor , James A Watson

The rapid evolution of artificial intelligence in drug discovery encounters challenges with generalization and extensive training, yet Large Language Models (LLMs) offer promise in reshaping interactions with complex molecular data. Our…

Biomolecules · Quantitative Biology 2024-12-20 He Cao , Zijing Liu , Xingyu Lu , Yuan Yao , Yu Li

Organizations leverage anomaly and changepoint detection algorithms to detect changes in user behavior or service availability and performance. Many off-the-shelf detection algorithms, though effective, cannot readily be used in large…

Machine Learning · Computer Science 2022-05-25 Sourav Chatterjee , Rohan Bopardikar , Marius Guerard , Uttam Thakore , Xiaodong Jiang

Recently, automated medical image segmentation methods based on deep learning have achieved great success. However, they heavily rely on large annotated datasets, which are costly and time-consuming to acquire. Few-shot learning aims to…

Artificial Intelligence · Computer Science 2024-08-20 Jiayu Huo , Ruiqiang Xiao , Haotian Zheng , Yang Liu , Sebastien Ourselin , Rachel Sparks

Patient recruitment remains a major bottleneck in clinical trials, calling for scalable and automated solutions. We present TrialMatchAI, an AI-powered recommendation system that automates patient-to-trial matching by processing…

Recent advances in machine learning have made significant contributions to drug discovery. Deep neural networks in particular have been demonstrated to provide significant boosts in predictive power when inferring the properties and…

Machine Learning · Computer Science 2016-11-11 Han Altae-Tran , Bharath Ramsundar , Aneesh S. Pappu , Vijay Pande

In drug discovery, highly automated high-throughput laboratories are used to screen a large number of compounds in search of effective drugs. These experiments are expensive, so one might hope to reduce their cost by only experimenting on a…

Machine Learning · Computer Science 2025-04-15 Ihor Neporozhnii , Julien Roy , Emmanuel Bengio , Jason Hartford

Large language model pretraining is compute-intensive, yet many tokens contribute marginally to learning, resulting in inefficiency. We introduce Efficient Selective Language Modeling (ESLM), a risk-aware algorithm that improves training…

Machine Learning · Computer Science 2025-05-27 Melis Ilayda Bal , Volkan Cevher , Michael Muehlebach

Anomaly detection in large datasets is essential in astronomy and computer vision. However, due to a scarcity of labelled data, it is often infeasible to apply supervised methods to anomaly detection. We present AnomalyMatch, an anomaly…

Machine Learning · Computer Science 2025-10-31 Pablo Gómez , Laslo E. Ruhberg , Maria Teresa Nardone , David O'Ryan

Embedding models are integral to AI applications like semantic search, personalized recommendations, and retrieval augmented generation for LLMs, necessitating high-quality training data. However, the limited scalability of manual data…

Machine Learning · Computer Science 2024-02-27 Aivin V. Solatorio

With the explosion of massive, widely available unlabeled data in the past years, finding label and time efficient, robust learning algorithms has become ever more important in theory and in practice. We study the paradigm of active…

Machine Learning · Computer Science 2020-01-17 Max Hopkins , Daniel Kane , Shachar Lovett , Gaurav Mahajan

Instruction tuning improves the ability of large language models (LLMs) to follow diverse human instructions, but achieving strong performance on specific target tasks remains challenging. A critical bottleneck is selecting the most…

Machine Learning · Computer Science 2025-05-19 Da Ma , Gonghu Shang , Zhi Chen , Libo Qin , Yijie Luo , Lei Pan , Shuai Fan , Lu Chen , Kai Yu

General-purpose large language models (LLMs) that rely on in-context learning do not reliably deliver the scientific understanding and performance required for drug discovery tasks. Simply increasing model size or introducing reasoning…

The task of algorithm selection involves choosing an algorithm from a set of algorithms on a per-instance basis in order to exploit the varying performance of algorithms over a set of instances. The algorithm selection problem is attracting…

The adoption of machine learning (ML) and deep learning methods has revolutionized molecular medicine by driving breakthroughs in genomics, transcriptomics, drug discovery, and biological systems modeling. The increasing quantity,…

Recently, multi-modal physiological signals based emotion recognition has garnered increasing attention in the field of brain-computer interfaces. Nevertheness, the associated multi-modal physiological features are often high-dimensional…

Human-Computer Interaction · Computer Science 2025-08-11 Xueyuan Xu , Tianze Yu , Wenjia Dong , Fulin Wei , Li Zhuo

Molecular machine learning has been maturing rapidly over the last few years. Improved methods and the presence of larger datasets have enabled machine learning algorithms to make increasingly accurate predictions about molecular…

Instruction-tuning language models has become a crucial step in aligning them for general use. Typically, this process involves extensive training on large datasets, incurring high training costs. In this paper, we introduce a novel…

Computation and Language · Computer Science 2024-02-19 Dheeraj Mekala , Alex Nguyen , Jingbo Shang

Reliable seizure detection is critical for diagnosing and managing epilepsy, yet clinical workflows remain dependent on time-consuming manual EEG interpretation. While machine learning has shown promise, existing approaches often rely on…

Machine Learning · Computer Science 2025-08-12 Bartlomiej Chybowski , Shima Abdullateef , Hollan Haule , Alfredo Gonzalez-Sulser , Javier Escudero

Machine learning models are being used extensively in many important areas, but there is no guarantee a model will always perform well or as its developers intended. Understanding the correctness of a model is crucial to prevent potential…

Machine Learning · Computer Science 2021-04-13 Huong Ha , Sunil Gupta , Santu Rana , Svetha Venkatesh