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Decoding neural representations of visual stimuli from electroencephalography (EEG) offers valuable insights into brain activity and cognition. Recent advancements in deep learning have significantly enhanced the field of visual decoding of…

Computer Vision and Pattern Recognition · Computer Science 2024-09-10 Minsuk Choi , Hiroshi Ishikawa

Transformers for language modeling usually rely on deterministic internal computation, with uncertainty expressed mainly at the output layer. We introduce variational neurons into Transformer feed-forward computation so that uncertainty…

Machine Learning · Computer Science 2026-03-31 Yves Ruffenach

Humans and animals exhibit a range of interesting behaviors in dynamic environments, and it is unclear how our brains actively reformat this dense sensory information to enable these behaviors. Experimental neuroscience is undergoing a…

Neurons and Cognition · Quantitative Biology 2023-11-07 Aran Nayebi

Sequential recommendation effectively models dynamic user interests but continues to face challenges related to data sparsity. While self-supervised learning has alleviated this issue to some extent, most existing methods focus exclusively…

Information Retrieval · Computer Science 2026-05-28 Ziqiang Cui , Xing Tang , Peiyang Liu , Xiaokun Zhang , Shiwei Li , Xiuqiang He , Chen Ma

Research in medical imaging primarily focuses on discrete data representations that poorly scale with grid resolution and fail to capture the often continuous nature of the underlying signal. Neural Fields (NFs) offer a powerful alternative…

Image and Video Processing · Electrical Eng. & Systems 2026-03-06 Paul Friedrich , Florentin Bieder , Julian McGinnis , Julia Wolleb , Daniel Rueckert , Philippe C. Cattin

Deep learning, a branch of artificial intelligence, is a data-driven method that uses multiple layers of interconnected units or neurons to learn intricate patterns and representations directly from raw input data. Empowered by this…

Machine Learning · Computer Science 2025-07-28 Mohd Halim Mohd Noor , Ayokunle Olalekan Ige

In cognitive decoding, researchers aim to characterize a brain region's representations by identifying the cognitive states (e.g., accepting/rejecting a gamble) that can be identified from the region's activity. Deep learning (DL) methods…

Machine Learning · Computer Science 2021-08-17 Armin W. Thomas , Christopher Ré , Russell A. Poldrack

Bridging continuous perceptual signals and discrete symbolic reasoning is a fundamental challenge in AI systems that must operate under uncertainty. We present a neuro-symbolic framework that explicitly models and propagates uncertainty…

Artificial Intelligence · Computer Science 2025-11-19 Jiahao Wu , Shengwen Yu

The availability of large-scale neuronal population datasets necessitates new methods to model population dynamics and extract interpretable, scientifically translatable insights. Existing deep learning methods often overlook the biological…

Neurons and Cognition · Quantitative Biology 2024-11-14 Parsa Delavari , Ipek Oruc , Timothy H Murphy

Foundation models have shown remarkable success in fitting biological visual systems; however, their black-box nature inherently limits their utility for understanding brain function. Here, we peek inside a SOTA foundation model of neural…

Neurons and Cognition · Quantitative Biology 2025-12-10 Johannes Bertram , Luciano Dyballa , T. Anderson Keller , Savik Kinger , Steven W. Zucker

Neuroprosthetic brain-computer interfaces function via an algorithm which decodes neural activity of the user into movements of an end effector, such as a cursor or robotic arm. In practice, the decoder is often learned by updating its…

Machine Learning · Statistics 2016-09-28 Josh Merel , David Carlson , Liam Paninski , John P. Cunningham

Motivation: The scalable identification of bioactive compounds is essential for contemporary drug discovery. This process faces a key trade-off: structural screening offers scalability but lacks biological context, whereas high-content…

Quantitative Methods · Quantitative Biology 2026-03-17 Xiaoqing Lian , Pengsen Ma , Tengfeng Ma , Zhonghao Ren , Xibao Cai , Zhixiang Cheng , Bosheng Song , He Wang , Xiang Pan , Yangyang Chen , Sisi Yuan , Chen Lin

Understanding how neural networks transform inputs into outputs is crucial for interpreting and manipulating their behavior. Most existing approaches analyze internal representations by identifying hidden-layer activation patterns…

Machine Learning · Computer Science 2026-03-09 Joshua Brendan Melander , Zaki Alaoui , Shenghua Liu , Surya Ganguli , Stephen A. Baccus

Recent advances in visual generation have made significant strides in producing content of exceptional quality. However, most methods suffer from a fundamental problem - a bottleneck of inference computational efficiency. Most of these…

Computer Vision and Pattern Recognition · Computer Science 2025-02-04 Sahil Goyal , Debapriya Tula , Gagan Jain , Pradeep Shenoy , Prateek Jain , Sujoy Paul

Existing reinforcement learning methods for Chain-of-Thought reasoning suffer from two critical limitations. First, they operate as monolithic black boxes that provide undifferentiated reward signals, obscuring individual step contributions…

Computation and Language · Computer Science 2025-11-25 Ziyuan Gao , Di Liang , Xianjie Wu , Philippe Morel , Minlong Peng

The aim of the study is to investigate the complex mechanisms of speech perception and ultimately decode the electrical changes in the brain accruing while listening to speech. We attempt to decode heard speech from intracranial…

Human-Computer Interaction · Computer Science 2025-01-28 Milán András Fodor , Tamás Gábor Csapó , Frigyes Viktor Arthur

The integration of deep learning and neuroscience has been advancing rapidly, which has led to improvements in the analysis of brain activity and the understanding of deep learning models from a neuroscientific perspective. The…

Neurons and Cognition · Quantitative Biology 2023-06-21 Yu Takagi , Shinji Nishimoto

Every day, the human brain processes an immense volume of visual information, relying on intricate neural mechanisms to perceive and interpret these stimuli. Recent breakthroughs in functional magnetic resonance imaging (fMRI) have enabled…

Computer Vision and Pattern Recognition · Computer Science 2023-05-22 Matteo Ferrante , Furkan Ozcelik , Tommaso Boccato , Rufin VanRullen , Nicola Toschi

Electroencephalographic neurofeedback (EEG-NF) has been proposed as a promising technique to modulate brain activity through real-time EEG-based feedback. Alpha neurofeedback in particular is believed to induce rapid self-regulation of…

Neurons and Cognition · Quantitative Biology 2025-09-15 Jacob Maaz , Laurent Waroquier , Alexandra Dia , Véronique Paban , Arnaud Rey

Auditory attention decoding (AAD) aims to extract from brain activity the attended speaker amidst candidate speakers, offering promising applications for neuro-steered hearing devices and brain-computer interfacing. This pilot study makes a…

Neurons and Cognition · Quantitative Biology 2024-10-15 H. A. Scheppink , S. Ahmadi , P. Desain , M. Tangermann , J. Thielen
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