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Related papers: A Phase-Field Model for Vesicle Membranes Incorpor…

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Lipid vesicles play a key role in fundamental biological processes. Despite recent progress, we lack a complete understanding of the non-equilibrium dynamics of vesicles due to challenges associated with long-time observation of shape…

Biological Physics · Physics 2019-10-18 Dinesh Kumar , Channing M. Richter , Charles M. Schroeder

A diffuse-interface model for microstructure with an arbitrary number of components and phases was developed from basic thermodynamic and kinetic principles and formalized within a variational framework. The model includes a composition…

Materials Science · Physics 2011-07-28 Daniel A. Cogswell , W. Craig Carter

A systematic investigation of the phase separation dynamics in self-assembled multi-component bilayer fluid vesicles and open membranes is presented. We use large-scale dissipative particle dynamics to explicitly account for solvent,…

Soft Condensed Matter · Physics 2015-06-25 Mohamed Laradji , P. B. Sunil Kumar

While the behavior of vesicles in thermodynamic equilibrium has been studied extensively, how active forces control vesicle shape transformations is not understood. Here, we combine theory and simulations to study the shape behavior of…

Soft Condensed Matter · Physics 2019-10-09 Yao Li , Pieter Rein ten Wolde

In many processes for crystalline materials such as precipitation, heteroepitaxy, alloying, and phase transformation, lattice expansion or compression of embedded domains occurs. This can significantly alter the mechanical response of the…

Mathematical Physics · Physics 2023-12-13 Marco Salvalaglio , Karthikeyan Chockalingam , Axel Voigt , Willy Dörfler

Various biological and chemical processes lead to the nucleation and growth of non-wetting fluid bubbles within the pore space of a granular medium, such as the formation of gas bubbles in liquid-saturated lake-bed sediments. In…

Soft Condensed Matter · Physics 2022-05-13 Oliver W. Paulin , Liam C. Morrow , Matthew G. Hennessy , Christopher W. MacMinn

We consider phase-field models with and without lateral flow for the numerical simulation of lateral phase separation and coarsening in lipid membranes. For the numerical solution of these models, we apply an unfitted finite element method…

Numerical Analysis · Mathematics 2023-06-02 Maxim Olshanskii , Yerbol Palzhanov , Annalisa Quaini

Simple models for spherical particles with a soft shell have been shown to self-assemble into numerous crystal phases and even quasicrystals. However, most of these models rely on a simple pairwise interaction, which is usually a valid…

Soft Condensed Matter · Physics 2020-09-03 Emanuele Boattini , Nina Bezem , Sudeep N. Punnathanam , Frank Smallenburg , Laura Filion

With tangent angle perturbation approach the axial symmetry deformation of a spherical vesicle in large under the pressure changes is studied by the elasticity theory of Helfrich spontaneous curvature model.Three main results in axial…

Biological Physics · Physics 2009-11-07 Jianjun Zhou , Yong Zhang , Xin Zhou , Ou-Yang Zhong-can

We find three distinct phases; a tubular phase, a planar phase, and the spherical phase, in a triangulated fluid surface model. It is also found that these phases are separated by discontinuous transitions. The fluid surface model is…

Statistical Mechanics · Physics 2009-11-13 Hiroshi Koibuchi

In active matter systems, deformable boundaries provide a mechanism to organize internal active stresses and perform work on the external environment. To study a minimal model of such a system, we perform particle-based simulations of an…

Soft Condensed Matter · Physics 2022-01-05 Matthew S. E. Peterson , Aparna Baskaran , Michael F. Hagan

The deformation of an initially spherical capsule, freely suspended in simple shear flow, can be computed analytically in the limit of small deformations [D. Barthes-Biesel, J. M. Rallison, The Time-Dependent Deformation of a Capsule Freely…

Soft Condensed Matter · Physics 2010-08-10 Timm Krüger , Fathollah Varnik , Dierk Raabe

In this paper, we study a hydrodynamical system modeling the deformation of vesicle membrane under external incompressible viscous flow fields. The system is in the Eulerian formulation and is governed by the coupling of the incompressible…

Analysis of PDEs · Mathematics 2013-01-30 Jihong Zhao , Qiao Liu

We consider a multiscale approach based on immersed methods for the efficient computational modeling of tissues composed of an elastic matrix (in two or three-dimensions) and a thin vascular structure (treated as a co-dimension two…

Numerical Analysis · Mathematics 2021-11-18 Luca Heltai , Alfonso Caiazzo

The $\xi$-based spatially adaptive three-field variable phase-field model for quasi-static anti-plane crack propagation is introduced. A dynamically optimized regularization length is integrated to improve computational efficiency and…

Numerical Analysis · Mathematics 2025-06-17 Maria P. Fernando , S. M. Mallikarjunaiah

We propose a systematic formulation of the migration behaviors of a vesicle in a Poiseuille flow based on Onsager's variational principle. Our model is described by a combination of the phase field theory for the vesicle and the…

Soft Condensed Matter · Physics 2014-11-03 Yutaka Oya , Toshihiro Kawakatsu

Topology optimization is concerned with the identification of optimal shapes of deformable bodies with respect to given target functionals. The focus of this paper is on a topology optimization problem for a time-evolving elastoplastic…

Analysis of PDEs · Mathematics 2021-06-21 Stefano Almi , Ulisse Stefanelli

In this paper, a lattice Boltzmann model is proposed to simulate solid-liquid phase change phenomena in multiphase systems. The model couples the thermal properties of the solidification front with the dynamics of the liquid droplet…

Fluid Dynamics · Physics 2024-04-04 Jiangxu Huang , Lei Wang , Zhenhua Chai , Baochang Shi

In this paper, we study a hydrodynamic system modeling the deformation of vesicle membranes in incompressible viscous fluids. The system consists of the Navier-Stokes equations coupled with a fourth order phase-field equation. In the three…

Analysis of PDEs · Mathematics 2013-02-26 Hao Wu , Xiang Xu

In this paper, we deal with the inverse problem of the shape reconstruction of cavities and inclusions embedded in a linear elastic isotropic medium from boundary displacement's measurements. For, we consider a constrained minimization…

Analysis of PDEs · Mathematics 2022-07-26 Andrea Aspri , Elena Beretta , Cecilia Cavaterra , Elisabetta Rocca , Marco Verani