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Molecular similarity search has been widely used in drug discovery to identify structurally similar compounds from large molecular databases rapidly. With the increasing size of chemical libraries, there is growing interest in the efficient…

Hardware Architecture · Computer Science 2021-09-15 Hongwu Peng , Shiyang Chen , Zhepeng Wang , Junhuan Yang , Scott A. Weitze , Tong Geng , Ang Li , Jinbo Bi , Minghu Song , Weiwen Jiang , Hang Liu , Caiwen Ding

High-performance tensor programs are crucial to guarantee efficient execution of deep neural networks. However, obtaining performant tensor programs for different operators on various hardware platforms is notoriously challenging.…

The rise of power-efficient embedded computers based on highly-parallel accelerators opens a number of opportunities and challenges for researchers and engineers, and paved the way to the era of edge computing. At the same time, advances in…

Distributed, Parallel, and Cluster Computing · Computer Science 2023-10-13 Paolo Burgio , Gianluca Brilli

Despite the numerous uses of semidefinite programming (SDP) and its universal solvability via interior point methods (IPMs), it is rarely applied to practical large-scale problems. This mainly owes to the computational cost of IPMs that…

Optimization and Control · Mathematics 2024-03-19 Yifan Ran , Stefan Vlaski , Wei Dai

Electron ptychography enables dose-efficient atomic-resolution imaging, but conventional reconstruction algorithms suffer from noise sensitivity, slow convergence, and extensive manual hyperparameter tuning for regularization, especially in…

Image and Video Processing · Electrical Eng. & Systems 2025-11-12 Arthur R. C. McCray , Stephanie M. Ribet , Georgios Varnavides , Colin Ophus

General matrix/matrix multiplication (GEMM) is crucial for scientific computing and machine learning. However, the increased scale of the computing platforms raises concerns about hardware and software reliability. In this poster, we…

Distributed, Parallel, and Cluster Computing · Computer Science 2023-05-10 Shixun Wu , Yujia Zhai , Jiajun Huang , Zizhe Jian , Zizhong Chen

This work presents a GPU thread mapping approach that allows doing fast parallel stencil-like computations on discrete fractals using their compact representation. The intuition behind is to employ two GPU tensor-core accelerated thread…

Distributed, Parallel, and Cluster Computing · Computer Science 2021-10-26 Felipe A. Quezada , Cristóbal A. Navarro

It has been widely accepted that Graphics Processing Units (GPU) is one of promising schemes for encryption acceleration, in particular, the support of complex mathematical calculations such as integer and logical operations makes the…

Distributed, Parallel, and Cluster Computing · Computer Science 2019-02-15 Canhui Wang , Xiaowen Chu

Modern graphics computing units (GPUs) are designed and optimized to perform highly parallel numerical calculations. This parallelism has enabled (and promises) significant advantages, both in terms of energy performance and calculation. In…

Hardware Architecture · Computer Science 2021-10-26 Quentin Gallouédec

Convolutional Neural Networks (CNNs) remain prevalent in computer vision applications, and FPGAs, known for their flexibility and energy efficiency, have become essential components in heterogeneous acceleration systems. However,…

Hardware Architecture · Computer Science 2025-06-16 Guoyu Li , Pengbo Zheng , Jian Weng , Enshan Yang

Efficient exploitation of exascale architectures requires rethinking of the numerical algorithms used in many large-scale applications. These architectures favor algorithms that expose ultra fine-grain parallelism and maximize the ratio of…

Tensor decomposition is a fundamental technique widely applied in signal processing, machine learning, and various other fields. However, traditional tensor decomposition methods encounter limitations when jointly analyzing multi-block…

Machine Learning · Computer Science 2024-06-27 Xiulin Wang , Jing Liu , Fengyu Cong

In this paper, we discuss numerical methods for the eigenvalue decomposition of real symmetric matrices. While many existing methods can compute approximate eigenpairs with sufficiently small backward errors, the magnitude of the resulting…

Numerical Analysis · Mathematics 2026-02-24 Takeshi Terao , Katsuhisa Ozaki

The state-of-art seismic imaging techniques treat inversion tasks such as FWI and LSRTM as PDE-constrained optimization problems. Due to the large-scale nature, gradient-based optimization algorithms are preferred in practice to update the…

Numerical Analysis · Mathematics 2020-11-16 Yunan Yang

Mixed-precision quantization is a popular approach for compressing deep neural networks (DNNs). However, it is challenging to scale the performance efficiently with mixed-precision DNNs given the current FPGA architecture and conventional…

Hardware Architecture · Computer Science 2023-11-07 Yuzong Chen , Jordan Dotzel , Mohamed S. Abdelfattah

Deep neural networks (DNNs) face significant challenges when deployed on resource-constrained extreme edge devices due to their computational and data-intensive nature. While standalone accelerators tailored for specific application…

Hardware Architecture · Computer Science 2024-11-22 Xiaoling Yi , Ryan Antonio , Joren Dumoulin , Jiacong Sun , Josse Van Delm , Guilherme Paim , Marian Verhelst

Driven by deep learning, there has been a surge of specialized processors for matrix multiplication, referred to as TensorCore Units (TCUs). These TCUs are capable of performing matrix multiplications on small matrices (usually 4x4 or…

Performance · Computer Science 2019-11-26 Abdul Dakkak , Cheng Li , Isaac Gelado , Jinjun Xiong , Wen-mei Hwu

It is a challenging task to deploy computationally and memory intensive State-of-the-art deep neural networks (DNNs) on embedded systems with limited hardware resources and power budgets. Recently developed techniques like Deep Compression…

Computer Vision and Pattern Recognition · Computer Science 2018-04-13 Yuechao Gao , Nianhong Liu , Sheng Zhang

This paper presents a heterogeneous adaptive mesh refinement (AMR) framework for efficient simulation of moderately stiff reactive problems. This framework features an elaborate subcycling-in-time algorithm along with a specialized…

Computational Physics · Physics 2025-06-04 Yuqi Wang , Yadong Zeng , Ralf Deiterding , Jianhan Liang

The Nvidia GPU architecture has introduced new computing elements such as the \textit{tensor cores}, which are special processing units dedicated to perform fast matrix-multiply-accumulate (MMA) operations and accelerate \textit{Deep…

Distributed, Parallel, and Cluster Computing · Computer Science 2019-03-12 Roberto Carrasco , Raimundo Vega , Cristóbal A. Navarro