Related papers: Polynomial invariants of cyclically ordered graphs
The presence of slipknots in configurations of proteins and DNA has been shown to affect their functionality, or alter it entirely. Historically, polymers are modeled as polygonal chains in space. As an alternative to space curves, we…
Knowledge Graphs (KG) constitute a flexible representation of complex relationships between entities particularly useful for biomedical data. These KG, however, are very sparse with many missing edges (facts) and the visualisation of the…
Algorithmic computation in polynomial rings is a classical topic in mathematics. However, little attention has been given to the case of rings with an infinite number of variables until recently when theoretical efforts have made possible…
Recent investigations in computational biology focus on a family of 2-colored digraphs, called 2-colored best match graphs, which naturally arise from rooted phylogenetic trees. Actually the defining properties of such graphs are…
We call an oriented odd cycle alternating if it has exactly one vertex whose in-degree and out-degree are both positive. In this paper, we investigate whether certain graphs admit an orientation that avoids alternating odd cycles as…
Invariant theory is concerned with functions that do not change under the action of a given group. Here we communicate an approach based on tensor networks to represent polynomial local unitary invariants of quantum states. This graphical…
Recent investigations in computational biology have focused on a family of 2-colored digraphs, called 2-colored best match graphs, which naturally arise from rooted phylogenetic trees. Actually the defining properties of such graphs are…
For each commutative, graded algebra with finite dimension in each degree, we construct a graded cohomology theory for graphs whose graded Euler characteristic is the chromatic polynomial of the graph. This extends our previous work which…
Graph inverse semigroups generalize the polycyclic inverse monoids and play an important role in the theory of C*-algebras. This paper has two main goals: first, to provide an abstract characterization of graph inverse semigroups; and…
In the present paper, we introduce the concept of universal graph series. We then present four invariants of graphs and discuss some of their properties. In particular, one of these invariants is a generalization of the chromatic symmetric…
In 2010, Turaev introduced knotoids as a variation on knots that replaces the embedding of a circle with the embedding of a closed interval with two endpoints which here we call poles. We define generalized knotoids to allow arbitrarily…
Given any unoriented link diagram, a group of new knot invariants are constructed. Each of them satisfies a generalized 4 term skein relation. The coefficients of each invariant is from a commutative ring. Homomorphisms and representations…
The oriented chromatic polynomial of a oriented graph outputs the number of oriented $k$-colourings for any input $k$. We fully classify those oriented graphs for which the oriented graph has the same chromatic polynomial as the underlying…
We strengthen and put in a broader perspective previous results of the first two authors on colliding permutations. The key to the present approach is a new non-asymptotic invariant for graphs.
In this article, we construct a generating set of rational invariants for the action of the orthogonal group $\text{O}(n)$ on the space $\mathbb{R}[x_1,\dots,x_n]_{2d}$ of real homogeneous polynomials of even degree $2d$. This generalizes a…
Finite order invariants (Vassiliev invariants) of knots are expressed in terms of weight systems, that is, functions on chord diagrams satisfying the four-term relations. Weight systems have graph analogues, so-called $4$-invariants of…
Directed acyclic graphs (DAGs) are a class of graphs commonly used in practice, with examples that include electronic circuits, Bayesian networks, and neural architectures. While many effective encoders exist for DAGs, it remains…
Finite-order invariants of knots in arbitrary 3-manifolds (including non-orientable ones) are constructed and studied by methods of the topology of discriminant sets. Obstructions to the integrability of admissible weight systems to…
A graph drawing in the plane is called an almost embedding if images of any two non-adjacent simplices (i.e. vertices or edges) are disjoint. We introduce integer invariants of almost embeddings: winding number, cyclic and triodic Wu…
Graph polynomials are deemed useful if they give rise to algebraic characterizations of various graph properties, and their evaluations encode many other graph invariants. Algebraic: The complete graphs $K_n$ and the complete bipartite…