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Long-term biomolecular dynamics are critical for understanding key evolutionary transformations in molecular systems. However, capturing these processes requires extended simulation timescales that often exceed the practical limits of…

Quantitative Methods · Quantitative Biology 2025-07-04 Wenqi Zeng , Lu Zhang , Yuan Yao

Large-scale pre-trained models (PTMs) such as BERT and GPT have recently achieved great success in Natural Language Processing and Computer Vision domains. However, the development of PTMs on healthcare time-series data is lagging…

Machine Learning · Computer Science 2024-09-10 Ziyang Song , Qincheng Lu , Hao Xu , He Zhu , David L. Buckeridge , Yue Li

Accurate predictions and representations of plant growth patterns in simulated and controlled environments are important for addressing various challenges in plant phenomics research. This review explores various works on state-of-the-art…

Quantitative Methods · Quantitative Biology 2025-07-17 Mohamed Debbagh , Shangpeng Sun , Mark Lefsrud

Over the past few decades, the hydrology community has witnessed notable advancements in streamflow prediction, particularly with the introduction of cutting-edge machine-learning algorithms. Recurrent neural networks, especially Long…

Machine Learning · Computer Science 2023-05-23 Sinan Rasiya Koya , Tirthankar Roy

This paper presents a physics-informed framework that integrates graph convolutional networks (GCN) with long short-term memory (LSTM) architecture to forecast microstructure evolution over long time horizons in both 2D and 3D with…

Materials Science · Physics 2025-09-19 Hamidreza Razavi , Nele Moelans

With the emergence of new application areas such as cyber-physical systems and human-in-the-loop applications ensuring a specific level of end-to-end network latency with high reliability (e.g., 99.9%) is becoming increasingly critical. To…

Networking and Internet Architecture · Computer Science 2025-03-20 Samie Mostafavi , Gourav Prateek Sharma , Ahmad Traboulsi , James Gross

We introduce a data-driven forecasting method for high-dimensional chaotic systems using long short-term memory (LSTM) recurrent neural networks. The proposed LSTM neural networks perform inference of high-dimensional dynamical systems in…

Computational Physics · Physics 2019-09-20 Pantelis R. Vlachas , Wonmin Byeon , Zhong Y. Wan , Themistoklis P. Sapsis , Petros Koumoutsakos

Transformers are the dominant architecture for sequence modeling, but there is growing interest in models that use a fixed-size latent state that does not depend on the sequence length, which we refer to as "generalized state space models"…

Machine Learning · Computer Science 2024-06-05 Samy Jelassi , David Brandfonbrener , Sham M. Kakade , Eran Malach

The strong growth of renewable energy sources and the high volatility in power generation of these sources, as well as the increasing amount of volatile energy consumption is leading to major challenges in the electrical grid. In order to…

Signal Processing · Electrical Eng. & Systems 2020-09-28 Katharina Brauns , Christoph Scholz , Andre Baier , Dominik Jost

Multivariate time series forecasting focuses on predicting future values based on historical context. State-of-the-art sequence-to-sequence models rely on neural attention between timesteps, which allows for temporal learning but fails to…

Machine Learning · Computer Science 2023-03-21 Jake Grigsby , Zhe Wang , Nam Nguyen , Yanjun Qi

The extensive adoption of web technologies in the finance and investment sectors has led to an explosion of financial data, which contributes to the complexity of the forecasting task. Traditional machine learning models exhibit limitations…

Machine Learning · Computer Science 2026-01-21 Renjun Jia , Zian Liu , Peng Zhu , Dawei Cheng , Yuqi Liang

Recent advances in machine learning such as Long Short-Term Memory (LSTM) models and Transformers have been widely adopted in hydrological applications, demonstrating impressive performance amongst deep learning models and outperforming…

For a number of years since its introduction to hydrology, recurrent neural networks like long short-term memory (LSTM) have proven remarkably difficult to surpass in terms of daily hydrograph metrics on known, comparable benchmarks.…

Machine Learning · Computer Science 2023-06-22 Jiangtao Liu , Yuchen Bian , Chaopeng Shen

Weather forecasts sit upstream of high-stakes decisions in domains such as grid operations, aviation, agriculture, and emergency response. Yet forecast users often face a difficult trade-off. Many decision-relevant targets are functionals…

Machine Learning · Computer Science 2026-01-08 Paulius Rauba , Viktor Cikojevic , Fran Bartolic , Sam Levang , Ty Dickinson , Chase Dwelle

Time series forecasting plays a vital role across scientific, industrial, and environmental domains, especially when dealing with high-dimensional and nonlinear systems. While Transformer-based models have recently achieved state-of-the-art…

Machine Learning · Computer Science 2025-08-05 Ali Forootani , Mohammad Khosravi , Masoud Barati

Time series forecasting is crucial in strategic planning and decision-making across various industries. Traditional forecasting models mainly concentrate on numerical time series data, often overlooking important textual information such as…

Computation and Language · Computer Science 2025-08-07 Chanjuan Liu , Shengzhi Wang , Enqiang Zhu

Mitigating the substantial undesirable impact of transportation systems on the environment is paramount. Thus, predicting Greenhouse Gas (GHG) emissions is one of the profound topics, especially with the emergence of intelligent…

Signal Processing · Electrical Eng. & Systems 2020-12-07 Lama Alfaseeh , Ran Tu , Bilal Farooq , Marianne Hatzopoulou

Despite recent progress in time-series foundation models, challenges persist in improving representation learning and adapting to diverse downstream tasks. We introduce a General Time-series Model (GTM), which advances representation…

Machine Learning · Computer Science 2026-03-13 Cheng He , Xu Huang , Gangwei Jiang , Zhaoyi Li , Defu Lian , Hong Xie , Enhong Chen , Xijie Liang , Zengrong Zheng , Patrick P. C. Lee

Spatiotemporal time series nowcasting should preserve temporal and spatial dynamics in the sense that generated new sequences from models respect the covariance relationship from history. Conventional feature extractors are built with deep…

Machine Learning · Computer Science 2022-01-19 Bo Feng , Geoffrey Fox

Rising global energy demand from population growth raises concerns about the sustainability of fossil fuels. Consequently, the energy sector has increasingly transitioned to renewable energy sources like solar and wind, which are naturally…

Systems and Control · Electrical Eng. & Systems 2025-09-30 Afsaneh Mollasalehi , Armin Farhadi