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Electroencephalography (EEG) is a widely used non-invasive technique for measuring brain activity in brain-computer interface (BCI) applications. Supervised EEG decoding models often struggle to generalize across tasks, subjects, and…

Artificial Intelligence · Computer Science 2026-05-29 Ayse Betul Yuce , Sebastian Stober

We develop an unsupervised machine learning algorithm for the automated discovery and identification of traveling waves in spatio-temporal systems governed by partial differential equations (PDEs). Our method uses sparse regression and…

Computational Physics · Physics 2020-05-20 Ariana Mendible , Steven L. Brunton , Aleksandr Y. Aravkin , Wes Lowrie , J. Nathan Kutz

We propose a new class of linear Transformers called FourierLearner-Transformers (FLTs), which incorporate a wide range of relative positional encoding mechanisms (RPEs). These include regular RPE techniques applied for sequential data, as…

Length generalization is the ability of language models to maintain performance on inputs longer than those seen during pretraining. In this work, we introduce a simple yet powerful position encoding (PE) strategy, Random Float Sampling…

Machine Learning · Computer Science 2026-02-17 Atsushi Shimizu , Shohei Taniguchi , Yutaka Matsuo

Rotary Position Embeddings (RoPE) have become a standard for encoding sequence order in Large Language Models (LLMs) by applying rotations to query and key vectors in the complex plane. Standard implementations, however, utilize only the…

Computation and Language · Computer Science 2025-12-09 Xiaoran Liu , Yuerong Song , Zhigeng Liu , Zengfeng Huang , Qipeng Guo , Zhaoxiang Liu , Shiguo Lian , Ziwei He , Xipeng Qiu

Length generalization, the ability to generalize from small training context sizes to larger ones, is a critical challenge in the development of Transformer-based language models. Positional encoding (PE) has been identified as a major…

Computation and Language · Computer Science 2023-11-08 Amirhossein Kazemnejad , Inkit Padhi , Karthikeyan Natesan Ramamurthy , Payel Das , Siva Reddy

Standard transformer attention computes pairwise token similarity but treats all tokens as equally salient and all positions as equally local, regardless of the informational structure of the input. We identify two complementary inductive…

Machine Learning · Computer Science 2026-05-27 Athanasios Zeris

Unsupervised pre-training on vast amounts of graph data is critical in real-world applications wherein labeled data is limited, such as molecule properties prediction or materials science. Existing approaches pre-train models for specific…

Machine Learning · Computer Science 2024-10-01 Viet Anh Nguyen , Nhat Khang Ngo , Truong Son Hy

We propose a conditional positional encoding (CPE) scheme for vision Transformers. Unlike previous fixed or learnable positional encodings, which are pre-defined and independent of input tokens, CPE is dynamically generated and conditioned…

Computer Vision and Pattern Recognition · Computer Science 2023-02-14 Xiangxiang Chu , Zhi Tian , Bo Zhang , Xinlong Wang , Chunhua Shen

Recent neural heuristics for the Vehicle Routing Problem (VRP) primarily rely on node coordinates as input, which may be less effective in practical scenarios where real cost metrics-such as edge-based distances-are more relevant. To…

Machine Learning · Computer Science 2025-06-23 Dian Meng , Zhiguang Cao , Yaoxin Wu , Yaqing Hou , Hongwei Ge , Qiang Zhang

Natural reading orders of words are crucial for information extraction from form-like documents. Despite recent advances in Graph Convolutional Networks (GCNs) on modeling spatial layout patterns of documents, they have limited ability to…

Computation and Language · Computer Science 2021-06-22 Chen-Yu Lee , Chun-Liang Li , Chu Wang , Renshen Wang , Yasuhisa Fujii , Siyang Qin , Ashok Popat , Tomas Pfister

Positional encodings are employed to capture the high frequency information of the encoded signals in implicit neural representation (INR). In this paper, we propose a novel positional encoding method which improves the reconstruction…

Computer Vision and Pattern Recognition · Computer Science 2023-11-13 Bharath Bhushan Damodaran , Francois Schnitzler , Anne Lambert , Pierre Hellier

Rotary Position Embedding (RoPE) is widely adopted in large language models (LLMs) due to its efficient encoding of relative positions with strong extrapolation capabilities. However, while its application in higher-dimensional input…

Machine Learning · Computer Science 2025-07-16 Haiping Liu , Lijing Lin , Jingyuan Sun , Zhegong Shangguan , Mauricio A. Alvarez , Hongpeng Zhou

Neural language models process sequences of words, but the mathematical operations inside them are insensitive to the order in which words appear. Positional encodings are the component added to remedy this. Despite their importance,…

Machine Learning · Computer Science 2026-04-08 Giansalvo Cirrincione

The decoder-only Transformer architecture with causal masking and relative position encoding (RPE) has become the de facto choice in language modeling. Despite its exceptional performance across various tasks, we have identified two…

Computation and Language · Computer Science 2024-02-08 Qingyu Yin , Xuzheng He , Xiang Zhuang , Yu Zhao , Jianhua Yao , Xiaoyu Shen , Qiang Zhang

Recent studies have revealed various manifestations of position bias in transformer architectures, from the "lost-in-the-middle" phenomenon to attention sinks, yet a comprehensive theoretical understanding of how attention masks and…

Machine Learning · Computer Science 2025-08-12 Xinyi Wu , Yifei Wang , Stefanie Jegelka , Ali Jadbabaie

Operator learning for Partial Differential Equations (PDEs) is rapidly emerging as a promising approach for surrogate modeling of intricate systems. Transformers with the self-attention mechanism$\unicode{x2013}$a powerful tool originally…

Machine Learning · Computer Science 2024-05-17 Junfeng Chen , Kailiang Wu

Generative recommenders, typically transformer-based autoregressive models, predict the next item or action from a user's interaction history. Their effectiveness depends on how the model represents where an interaction event occurs in the…

Information Retrieval · Computer Science 2025-10-24 Xiaokai Wei , Jiajun Wu , Daiyao Yi , Reza Shirkavand , Michelle Gong

Transformers have emerged as a universal backbone across 3D perception, video generation, and world models for autonomous driving and embodied AI, where understanding camera geometry is essential for grounding visual observations in…

Computer Vision and Pattern Recognition · Computer Science 2026-03-27 Cheng Zhang , Boying Li , Meng Wei , Yan-Pei Cao , Camilo Cruz Gambardella , Dinh Phung , Jianfei Cai

Relative positional encoding is widely used in vanilla and linear transformers to represent positional information. However, existing encoding methods of a vanilla transformer are not always directly applicable to a linear transformer,…

Computation and Language · Computer Science 2023-07-19 Zhen Qin , Weixuan Sun , Kaiyue Lu , Hui Deng , Dongxu Li , Xiaodong Han , Yuchao Dai , Lingpeng Kong , Yiran Zhong
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