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Related papers: Unlocking Advanced Graph Machine Learning Insights…

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Graph contrastive learning (GCL) has recently emerged as a new concept which allows for capitalizing on the strengths of graph neural networks (GNNs) to learn rich representations in a wide variety of applications which involve abundant…

Machine Learning · Computer Science 2024-06-26 Yuzhou Chen , Jose Frias , Yulia R. Gel

Motivation: Biomedical knowledge graphs (KGs) are crucial for drug discovery and disease understanding, yet their completion and reasoning are challenging. Knowledge Embedding (KE) methods capture global semantics but struggle with dynamic…

Artificial Intelligence · Computer Science 2025-07-23 Yitong Lin , Jiaying He , Jiahe Chen , Xinnan Zhu , Jianwei Zheng , Tao Bo

Recent work on Graph Neural Networks has demonstrated that self-supervised pretraining can further enhance performance on downstream graph, link, and node classification tasks. However, the efficacy of pretraining tasks has not been fully…

Machine Learning · Computer Science 2023-03-28 Jonathan Pilault , Michael Galkin , Bahare Fatemi , Perouz Taslakian , David Vasquez , Christopher Pal

To alleviate data sparsity and cold-start problems of traditional recommender systems (RSs), incorporating knowledge graphs (KGs) to supplement auxiliary information has attracted considerable attention recently. However, simply integrating…

Information Retrieval · Computer Science 2022-01-04 Yankai Chen , Yaming Yang , Yujing Wang , Jing Bai , Xiangchen Song , Irwin King

Knowledge Graph (KG) is a graph based data structure to represent facts of the world where nodes represent real world entities or abstract concept and edges represent relation between the entities. Graph as representation for knowledge has…

Social and Information Networks · Computer Science 2024-04-16 Manita Pote

Graph Machine Learning (GML) is receiving growing interest within the pharmaceutical and biotechnology industries for its ability to model biomolecular structures, the functional relationships between them, and integrate multi-omic datasets…

Graph learning has become essential in various domains, including recommendation systems and social network analysis. Graph Neural Networks (GNNs) have emerged as promising techniques for encoding structural information and improving…

Machine Learning · Computer Science 2024-10-10 Lianghao Xia , Ben Kao , Chao Huang

Graph neural networks (GNNs) are prominent for their effectiveness in processing graph data for semi-supervised node classification tasks. Most works of GNNs assume that the observed structure accurately represents the underlying node…

Machine Learning · Computer Science 2024-11-08 Shuangjie Li , Jiangqing Song , Baoming Zhang , Gaoli Ruan , Junyuan Xie , Chongjun Wang

Knowledge graphs (KGs) are useful for analyzing social structures, community dynamics, institutional memberships, and other complex relationships across domains from sociology to public health. While recent advances in large language models…

Computation and Language · Computer Science 2025-06-17 Erica Cai , Brendan O'Connor

Graph deep learning has recently emerged as a powerful ML concept allowing to generalize successful deep neural architectures to non-Euclidean structured data. Such methods have shown promising results on a broad spectrum of applications…

Machine Learning · Computer Science 2022-05-16 Anees Kazi , Luca Cosmo , Seyed-Ahmad Ahmadi , Nassir Navab , Michael Bronstein

Graph Convolutional Neural Networks (GCNs) possess strong capabilities for processing graph data in non-grid domains. They can capture the topological logical structure and node features in graphs and integrate them into nodes' final…

Machine Learning · Computer Science 2024-03-26 Yinwei Wu

Graph data in real-world scenarios undergo rapid and frequent changes, making it challenging for existing graph models to effectively handle the continuous influx of new data and accommodate data withdrawal requests. The approach to…

Machine Learning · Computer Science 2025-08-26 Jiaxing Miao , Liang Hu , Qi Zhang , Longbing Cao

Graph Neural Networks (GNNs), a generalization of deep neural networks on graph data have been widely used in various domains, ranging from drug discovery to recommender systems. However, GNNs on such applications are limited when there are…

Machine Learning · Computer Science 2021-11-09 Debmalya Mandal , Sourav Medya , Brian Uzzi , Charu Aggarwal

Despite the wide application of Graph Convolutional Network (GCN), one major limitation is that it does not benefit from the increasing depth and suffers from the oversmoothing problem. In this work, we first characterize this phenomenon…

Graph Neural Networks (GNNs) have achieved great success in Knowledge Graph Completion (KGC) by modelling how entities and relations interact in recent years. However, the explanation of the predicted facts has not caught the necessary…

Machine Learning · Computer Science 2024-10-21 Heng Chang , Jiangnan Ye , Alejo Lopez Avila , Jinhua Du , Jia Li

In the last decades, people have been consuming and combining more drugs than before, increasing the number of Drug-Drug Interactions (DDIs). To predict unknown DDIs, recently, studies started incorporating Knowledge Graphs (KGs) since they…

Artificial Intelligence · Computer Science 2023-08-14 Lizzy Farrugia , Lilian M. Azzopardi , Jeremy Debattista , Charlie Abela

Knowledge Graphs (KGs) structure real-world entities and their relationships into triples, enhancing machine reasoning for various tasks. While domain-specific KGs offer substantial benefits, their manual construction is often inefficient…

Computation and Language · Computer Science 2025-06-02 Jiaqi Sun , Shiyou Qian , Zhangchi Han , Wei Li , Zelin Qian , Dingyu Yang , Jian Cao , Guangtao Xue

While Large Language Models (LLMs) exhibit strong linguistic capabilities, their reliance on static knowledge and opaque reasoning processes limits their performance in knowledge intensive tasks. Knowledge graphs (KGs) offer a promising…

Computation and Language · Computer Science 2025-08-15 Dehao Tao , Guangjie Liu , Weizheng , Yongfeng Huang , Minghu jiang

Knowledge Graph (KG) completion is an important task that greatly benefits knowledge discovery in many fields (e.g. biomedical research). In recent years, learning KG embeddings to perform this task has received considerable attention.…

Machine Learning · Computer Science 2022-08-01 Adil Bahaj , Safae Lhazmir , Mounir Ghogho

Incorporating Knowledge Graphs (KG) into recommeder system has attracted considerable attention. Recently, the technical trend of Knowledge-aware Recommendation (KGR) is to develop end-to-end models based on graph neural networks (GNNs).…

Information Retrieval · Computer Science 2022-08-23 Ding Zou , Wei Wei , Ziyang Wang , Xian-Ling Mao , Feida Zhu , Rui Fang , Dangyang Chen