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Thermochemistry, ray-tracing radiation, and radiation-matter interactions are important processes which are computationally difficult to model in astrophysical simulations, addressed by introducing novel algorithms optimized for…

Instrumentation and Methods for Astrophysics · Physics 2026-02-03 Lile Wang

Automatic differentiation represents a paradigm shift in scientific programming, where evaluating both functions and their derivatives is required for most applications. By removing the need to explicitly derive expressions for gradients,…

Chemical Physics · Physics 2022-06-29 Muhammad F. Kasim , Susi Lehtola , Sam M. Vinko

Much of our mechanistic understanding of the functions of biological macromolecules is based on static structural experiments, which can be modelled either as single structures or conformational ensembles. While these provide us with…

Biomolecules · Quantitative Biology 2025-10-02 Daria Gusew , Carl G. Henning Hansen , Kresten Lindorff-Larsen

The latest observations of molecular gas and the atomic hydrogen content of local and high-redshift galaxies, coupled with how these correlate with star formation activity, have revolutionized our ideas about how to model star formation in…

Cosmology and Nongalactic Astrophysics · Physics 2012-10-19 Claudia del P. Lagos , Cedric G. Lacey , Carlton M. Baugh

The difficulty of simulating quantum systems, well-known to quantum chemists, prompted the idea of quantum computation. One can avoid the steep scaling associated with the exact simulation of increasingly large quantum systems on…

Star formation is a multi-scale problem, and only global simulations that account for the connection from the molecular cloud scale gas flow to the accreting protostar can reflect the observed complexity of protostellar systems.…

Astrophysics of Galaxies · Physics 2023-07-28 Rami Al-Belmpeisi , Vito Tuhtan , Mikkel Bregning Christensen , Rajika L Kuruwita , Troels Haugbølle

Modern computational chemistry has reached a stage at which massive exploration into chemical reaction space with unprecedented resolution with respect to the number of potentially relevant molecular structures has become possible. Various…

Chemical Physics · Physics 2020-04-27 Jan P. Unsleber , Markus Reiher

The sensitivity limits of space telescopes are imposed by uncalibrated errors in the point spread function, photon-noise, background light, and detector sensitivity. These are typically calibrated with specialized wavefront sensor hardware…

Instrumentation and Methods for Astrophysics · Physics 2024-06-18 Louis Desdoigts , Benjamin Pope , Jordan Dennis , Peter Tuthill

We present a new computational scheme aimed at reducing the complexity of the chemical networks in astrophysical models, one which is shown to markedly improve their computational efficiency. It contains a flux-reduction scheme that permits…

Instrumentation and Methods for Astrophysics · Physics 2015-06-04 T. Grassi , S. Bovino , F. A. Gianturco , P. Baiocchi , E. Merlin

Molecular simulations have assumed a paramount role in the fields of chemistry, biology, and material sciences, being able to capture the intricate dynamic properties of systems. Within this realm, coarse-grained (CG) techniques have…

Chemical Physics · Physics 2026-03-06 Daniele Angioletti , Stefano Raniolo , Vittorio Limongelli

Recent developments dedicated to the building of multiscale mechanical and chemical constitutive laws for energetic molecular crystals are presented and discussed. In particular, various tools have been specifically incorporated in…

Mesoscale and Nanoscale Physics · Physics 2025-08-05 Paul Lafourcade , Nicolas Bruzy , Paul Bouteiller , Jean-Bernard Maillet , Christophe Denoual

Geometric machine learning models such as graph neural networks have achieved remarkable success in recent years in chemical and materials science research for applications such as high-throughput virtual screening and atomistic…

Materials Science · Physics 2025-04-16 Lingyu Kong , Nima Shoghi , Guoxiang Hu , Pan Li , Victor Fung

Despite the long history of electrochemistry, there is a lack of quantitative algorithms that rigorously correlate experiment with theory. Electrochemical modeling has had advanced across empirical, analytical, numerical, and data-driven…

Turning the current experimental plasma accelerator state-of-the-art from a promising technology into mainstream scientific tools depends critically on high-performance, high-fidelity modeling of complex processes that develop over a wide…

Accelerator Physics · Physics 2018-12-26 J. -L. Vay , A. Almgren , J. Bell , L. Ge , D. P. Grote , M. Hogan , O. Kononenko , R. Lehe , A. Myers , C. Ng , J. Park , R. Ryne , O. Shapoval , M. Thevenet , W. Zhang

We predict how protoplanetary disks around low-mass young stars would appear in molecular lines observed with the ALMA interferometer. Our goal is to identify those molecules and transitions that can be used to probe and distinguish between…

Astrophysics · Physics 2009-11-13 D. Semenov , Ya. Pavlyuchenkov , Th. Henning , S. Wolf , R. Launhardt

Ensuring trustworthiness in open-world visual recognition requires models that are interpretable, fair, and robust to distribution shifts. Yet modern vision systems are increasingly deployed as proprietary black-box APIs, exposing only…

Computer Vision and Pattern Recognition · Computer Science 2026-04-16 Simone Carnemolla , Chiara Russo , Simone Palazzo , Quentin Bouniot , Daniela Giordano , Zeynep Akata , Matteo Pennisi , Concetto Spampinato

Simulating rare events, such as the transformation of a reactant into a product in a chemical reaction typically requires enhanced sampling techniques that rely on heuristically chosen collective variables (CVs). We propose using…

The TraX Engine is an advanced data processing tool developed by ADVACAM in collaboration with the European Space Agency (ESA), specifically designed for analyzing data from Timepix detectors equipped with various sensor materials (Si,…

While the number of detected molecules, particularly complex organic molecules, in the solid-state in astrophysical environments is still rather limited, laboratory experiments and astrochemical models predict many potential candidates.…

Solar and Stellar Astrophysics · Physics 2025-05-07 Alexey Potapov , Hendrik Linz , Jeroen Bouwman , Will Rocha , Johannes Martin , Sebastian Wolf , Thomas Henning , Hiroshi Terada

Foraging for resources is a ubiquitous activity conducted by living organisms in a shared environment to maintain their homeostasis. Modelling multi-agent foraging in-silico allows us to study both individual and collective emergent…

Multiagent Systems · Computer Science 2025-10-16 Siddharth Chaturvedi , Ahmed El-Gazzar , Marcel van Gerven
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