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Retrosynthesis prediction is one of the fundamental challenges in organic synthesis. The task is to predict the reactants given a core product. With the advancement of machine learning, computer-aided synthesis planning has gained…

Chemical Physics · Physics 2022-02-01 Yue Wan , Benben Liao , Chang-Yu Hsieh , Shengyu Zhang

Accurate prediction of dielectric tensors is essential for accelerating the discovery of next-generation inorganic dielectric materials. Existing machine learning approaches, such as equivariant graph neural networks, typically rely on…

Materials Science · Physics 2026-01-13 Haowei Hua , Chen Liang , Ding Pan , Irwin King , Shengchao Liu , Koji Tsuda , Wanyu Lin

The transformer-based semantic segmentation approaches, which divide the image into different regions by sliding windows and model the relation inside each window, have achieved outstanding success. However, since the relation modeling…

Computer Vision and Pattern Recognition · Computer Science 2023-08-17 Zizhang Wu , Yuanzhu Gan , Tianhao Xu , Fan Wang

How to obtain informative representations of molecules is a crucial prerequisite in AI-driven drug design and discovery. Recent researches abstract molecules as graphs and employ Graph Neural Networks (GNNs) for molecular representation…

Biomolecules · Quantitative Biology 2020-10-30 Yu Rong , Yatao Bian , Tingyang Xu , Weiyang Xie , Ying Wei , Wenbing Huang , Junzhou Huang

Electrocardiogram (ECG) classification is crucial for automated cardiac disease diagnosis, yet existing methods often struggle to capture local morphological details and long-range temporal dependencies simultaneously. To address these…

Machine Learning · Computer Science 2025-05-12 Md Kamrujjaman Mobin , Md Saiful Islam , Sadik Al Barid , Md Masum

Transformers have shown dominant performance across a range of domains including language and vision. However, their computational cost grows quadratically with the sequence length, making their usage prohibitive for resource-constrained…

Computation and Language · Computer Science 2023-10-24 Yinghan Long , Sayeed Shafayet Chowdhury , Kaushik Roy

Vision Transformers with various attention modules have demonstrated superior performance on vision tasks. While using sparsity-adaptive attention, such as in DAT, has yielded strong results in image classification, the key-value pairs…

Computer Vision and Pattern Recognition · Computer Science 2024-10-14 Nguyen Huu Bao Long , Chenyu Zhang , Yuzhi Shi , Tsubasa Hirakawa , Takayoshi Yamashita , Tohgoroh Matsui , Hironobu Fujiyoshi

Modeling boiling (an inherently chaotic, multiphase process central to energy and thermal systems) remains a significant challenge for neural PDE surrogates. Existing models require future input (e.g., bubble positions) during inference…

Machine Learning · Computer Science 2025-07-30 Sheikh Md Shakeel Hassan , Xianwei Zou , Akash Dhruv , Vishwanath Ganesan , Aparna Chandramowlishwaran

Global Station Weather Forecasting (GSWF) is a key meteorological research area, critical to energy, aviation, and agriculture. Existing time series forecasting methods often ignore or unidirectionally model spatial correlation when…

Machine Learning · Computer Science 2025-09-26 Hongyi Chen , Xiucheng Li , Xinyang Chen , Yun Cheng , Jing Li , Kehai Chen , Liqiang Nie

Transformers are increasingly dominating multi-modal reasoning tasks, such as visual question answering, achieving state-of-the-art results thanks to their ability to contextualize information using the self-attention and co-attention…

Computer Vision and Pattern Recognition · Computer Science 2021-03-30 Hila Chefer , Shir Gur , Lior Wolf

We propose a method for 3D shape reconstruction from unoriented point clouds. Our method consists of a novel SE(3)-equivariant coordinate-based network (TF-ONet), that parametrizes the occupancy field of the shape and respects the inherent…

Computer Vision and Pattern Recognition · Computer Science 2023-02-13 Evangelos Chatzipantazis , Stefanos Pertigkiozoglou , Edgar Dobriban , Kostas Daniilidis

Fully-supervised category-level pose estimation aims to determine the 6-DoF poses of unseen instances from known categories, requiring expensive mannual labeling costs. Recently, various self-supervised category-level pose estimation…

Computer Vision and Pattern Recognition · Computer Science 2024-03-20 Jingtao Sun , Yaonan Wang , Mingtao Feng , Chao Ding , Mike Zheng Shou , Ajmal Saeed Mian

Seismic data interpolation is a critical pre-processing step for improving seismic imaging quality and remains a focus of academic innovation. To address the computational inefficiencies caused by extensive iterative resampling in current…

In this work, we aim to improve the 3D reasoning ability of Transformers in multi-view 3D human pose estimation. Recent works have focused on end-to-end learning-based transformer designs, which struggle to resolve geometric information…

Computer Vision and Pattern Recognition · Computer Science 2023-11-21 Ziwei Liao , Jialiang Zhu , Chunyu Wang , Han Hu , Steven L. Waslander

Molecular property prediction is a critical task in computational drug discovery. While recent advances in Graph Neural Networks (GNNs) and Transformers have shown to be effective and promising, they face the following limitations:…

Prediction of a molecule's 3D conformer ensemble from the molecular graph holds a key role in areas of cheminformatics and drug discovery. Existing generative models have several drawbacks including lack of modeling important molecular…

Graph Transformers (GTs) have demonstrated great effectiveness across various graph analytical tasks. However, the existing GTs focus on training and testing graph data originated from the same distribution, but fail to generalize under…

Machine Learning · Computer Science 2026-03-16 Tianyin Liao , Ziwei Zhang , Yufei Sun , Chunyu Hu , Jianxin Li

Dynamic link prediction plays a crucial role in diverse applications including social network analysis, communication forecasting, and financial modeling. While recent Transformer-based approaches have demonstrated promising results in…

Machine Learning · Computer Science 2026-03-05 Hantong Feng , Yonggang Wu , Duxin Chen , Wenwu Yu

Rotation equivariance is a desirable property in many practical applications such as motion forecasting and 3D perception, where it can offer benefits like sample efficiency, better generalization, and robustness to input perturbations.…

Computer Vision and Pattern Recognition · Computer Science 2023-01-26 Serge Assaad , Carlton Downey , Rami Al-Rfou , Nigamaa Nayakanti , Ben Sapp

We introduce SurgFormer, a multiresolution gated transformer for data driven soft tissue simulation on volumetric meshes. High fidelity biomechanical solvers are often too costly for interactive use, so we train SurgFormer on solver…

Computer Vision and Pattern Recognition · Computer Science 2026-03-09 Ashkan Shahbazi , Elaheh Akbari , Kyvia Pereira , Jon S. Heiselman , Annie C. Benson , Garrison L. H. Johnston , Jie Ying Wu , Nabil Simaan , Michael I. Miga , Soheil Kolouri