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Predicting physical properties of materials from their crystal structures is a fundamental problem in materials science. In peripheral areas such as the prediction of molecular properties, fully connected attention networks have been shown…

Machine Learning · Computer Science 2024-03-19 Tatsunori Taniai , Ryo Igarashi , Yuta Suzuki , Naoya Chiba , Kotaro Saito , Yoshitaka Ushiku , Kanta Ono

Knowledge graph reasoning plays a vital role in various applications and has garnered considerable attention. Recently, path-based methods have achieved impressive performance. However, they may face limitations stemming from constraints in…

Artificial Intelligence · Computer Science 2024-12-18 Junnan Liu , Qianren Mao , Weifeng Jiang , Jianxin Li

Despite significant progress in 3D object detection, point clouds remain challenging due to sparse data, incomplete structures, and limited semantic information. Capturing contextual relationships between distant objects presents additional…

Computer Vision and Pattern Recognition · Computer Science 2026-05-11 Md Sohag Mia , Md Nahid Hasan , Muhammad Abdullah Adnan

Recently, Transformers for graph representation learning have become increasingly popular, achieving state-of-the-art performance on a wide-variety of graph datasets, either alone or in combination with message-passing graph neural networks…

Machine Learning · Computer Science 2024-05-07 Ayush Garg

Multi-modal entity alignment (MMEA) aims to discover identical entities across different knowledge graphs (KGs) whose entities are associated with relevant images. However, current MMEA algorithms rely on KG-level modality fusion strategies…

Artificial Intelligence · Computer Science 2023-08-01 Zhuo Chen , Jiaoyan Chen , Wen Zhang , Lingbing Guo , Yin Fang , Yufeng Huang , Yichi Zhang , Yuxia Geng , Jeff Z. Pan , Wenting Song , Huajun Chen

Accurately modeling agent behaviors is an important task in self-driving. It is also a task with many symmetries, such as equivariance to the order of agents and objects in the scene or equivariance to arbitrary roto-translations of the…

Robotics · Computer Science 2026-04-03 Scott Xu , Dian Chen , Kelvin Wong , Chris Zhang , Kion Fallah , Raquel Urtasun

Determining the aqueous solubility of molecules is a vital step in many pharmaceutical, environmental, and energy storage applications. Despite efforts made over decades, there are still challenges associated with developing a solubility…

Materials Science · Physics 2022-09-05 Gihan Panapitiya , Michael Girard , Aaron Hollas , Vijay Murugesan , Wei Wang , Emily Saldanha

Spiking Neural Networks have attracted significant attention in recent years due to their distinctive low-power characteristics. Meanwhile, Transformer models, known for their powerful self-attention mechanisms and parallel processing…

Neural and Evolutionary Computing · Computer Science 2024-12-19 Hangming Zhang , Alexander Sboev , Roman Rybka , Qiang Yu

Predicting the docking between proteins and ligands is a crucial and challenging task for drug discovery. However, traditional docking methods mainly rely on scoring functions, and deep learning-based docking approaches usually neglect the…

Biomolecules · Quantitative Biology 2026-01-06 Yiqiang Yi , Xu Wan , Yatao Bian , Le Ou-Yang , Peilin Zhao

Currently, one main research line in designing a more efficient vision transformer is reducing the computational cost of self attention modules by adopting sparse attention or using local attention windows. In contrast, we propose a…

Computer Vision and Pattern Recognition · Computer Science 2023-03-21 Haokui Zhang , Wenze Hu , Xiaoyu Wang

Motion forecasting for autonomous driving is a challenging task because complex driving scenarios result in a heterogeneous mix of static and dynamic inputs. It is an open problem how best to represent and fuse information about road…

Computer Vision and Pattern Recognition · Computer Science 2022-07-14 Nigamaa Nayakanti , Rami Al-Rfou , Aurick Zhou , Kratarth Goel , Khaled S. Refaat , Benjamin Sapp

The discovery of new molecules based on the original chemical molecule distributions is of great importance in medicine. The graph transformer, with its advantages of high performance and scalability compared to traditional graph networks,…

Machine Learning · Computer Science 2025-04-30 Ji Shi , Chengxun Xie , Zhonghao Li , Xinming Zhang , Miao Zhang

Metal-Organic Frameworks (MOFs) are materials with a high degree of porosity that can be used for applications in energy storage, water desalination, gas storage, and gas separation. However, the chemical space of MOFs is close to an…

Machine Learning · Computer Science 2022-10-26 Zhonglin Cao , Rishikesh Magar , Yuyang Wang , Amir Barati Farimani

Over the last few decades, modern industrial processes have investigated several cost-effective methodologies to improve the productivity and yield of semiconductor manufacturing. While playing an essential role in facilitating real-time…

Machine Learning · Computer Science 2021-11-16 Jaswanth Yella , Chao Zhang , Sergei Petrov , Yu Huang , Xiaoye Qian , Ali A. Minai , Sthitie Bom

Tandem mass spectra capture fragmentation patterns that provide key structural information about a molecule. Although mass spectrometry is applied in many areas, the vast majority of small molecules lack experimental reference spectra. For…

Machine Learning · Computer Science 2023-05-03 Adamo Young , Bo Wang , Hannes Röst

Organic synthesis is one of the key stumbling blocks in medicinal chemistry. A necessary yet unsolved step in planning synthesis is solving the forward problem: given reactants and reagents, predict the products. Similar to other work, we…

Chemical Physics · Physics 2019-09-13 Philippe Schwaller , Teodoro Laino , Théophile Gaudin , Peter Bolgar , Costas Bekas , Alpha A Lee

Deep learning for predicting the electronic-structure Hamiltonian of quantum systems necessitates satisfying the covariance laws, among which achieving SO(3)-equivariance without sacrificing the non-linear expressive capability of networks…

Computational Physics · Physics 2024-06-25 Shi Yin , Xinyang Pan , Xudong Zhu , Tianyu Gao , Haochong Zhang , Feng Wu , Lixin He

Prediction of solubility has been a complex and challenging physiochemical problem that has tremendous implications in the chemical and pharmaceutical industry. Recent advancements in machine learning methods have provided great scope for…

Disordered Systems and Neural Networks · Physics 2024-02-20 Vansh Ramani , Tarak Karmakar

Many machine learning tasks such as multiple instance learning, 3D shape recognition, and few-shot image classification are defined on sets of instances. Since solutions to such problems do not depend on the order of elements of the set,…

Machine Learning · Computer Science 2019-05-28 Juho Lee , Yoonho Lee , Jungtaek Kim , Adam R. Kosiorek , Seungjin Choi , Yee Whye Teh

Transformer models have achieved promising performances in point cloud segmentation. However, most existing attention schemes provide the same feature learning paradigm for all points equally and overlook the enormous difference in size…

Computer Vision and Pattern Recognition · Computer Science 2023-01-18 Junjie Zhou , Yongping Xiong , Chinwai Chiu , Fangyu Liu , Xiangyang Gong