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Advances in field techniques have lead to an increase in spatially-referenced capture-recapture data to estimate a species' population size as well as other demographic parameters and patterns of space usage. Statistical models for these…

Applications · Statistics 2014-05-09 Brian J. Reich , Beth Gardner

The occurrence and distributions of wildlife populations and communities are shifting as a result of global changes. To evaluate whether these shifts are negatively impacting biodiversity processes, it is critical to monitor the status,…

Populations and Evolution · Quantitative Biology 2021-09-07 Jeffrey W. Doser , Wendy Leuenberger , T. Scott Sillett , Michael T. Hallworth , Elise F. Zipkin

Spatiotemporal processes have the potential to be one of the most influential factors governing how fisheries targeting sedentary species respond to harvesting. Despite this, management strategy evaluation often fails to account for space…

Populations and Evolution · Quantitative Biology 2021-09-07 Christopher D. Nottingham , Russell B. Millar

Many research domains use data elicited from "citizen scientists" when a direct measure of a process is expensive or infeasible. However, participants may report incorrect estimates or classifications due to their lack of skill. We…

Biodiversity is declining at an unprecedented rate, impacting ecosystem services necessary to ensure food, water, and human health and well-being. Understanding the distribution of species and their habitats is crucial for conservation…

The difficulty to measure or predict species community composition at fine spatio-temporal resolution and over large spatial scales severely hampers our ability to understand species assemblages and take appropriate conservation measures.…

A Bayesian approach is developed to analyze change points in multivariate time series and space-time data. The methodology is used to assess the impact of extended inundation on the ecosystem of the Gulf Plains bioregion in northern…

Methodology · Statistics 2013-06-21 Chris Strickland , Robert Burdett , Robert Denham , Robert Kohn , Kerrie Mengersen

Modern methods for quantifying and predicting species distribution play a crucial part in biodiversity conservation. Occupancy models are a popular choice for analyzing species occurrence data as they allow to separate the observational…

Methodology · Statistics 2024-03-19 Jafet Belmont , Sara Martino , Janine Illian , Håvard Rue

The difficulty of monitoring biodiversity at fine scales and over large areas limits ecological knowledge and conservation efforts. To fill this gap, Species Distribution Models (SDMs) predict species across space from spatially explicit…

Computer Vision and Pattern Recognition · Computer Science 2024-12-12 Lukas Picek , Christophe Botella , Maximilien Servajean , César Leblanc , Rémi Palard , Théo Larcher , Benjamin Deneu , Diego Marcos , Pierre Bonnet , Alexis Joly

Occupancy modeling is a common approach to assess spatial and temporal species distribution patterns, while explicitly accounting for measurement errors common in detection-nondetection data. Numerous extensions of the basic single species…

Applications · Statistics 2022-05-04 Jeffrey W. Doser , Andrew O. Finley , Marc Kéry , Elise F. Zipkin

Species distribution models usually attempt to explain presence-absence or abundance of a species at a site in terms of the environmental features (socalled abiotic features) present at the site. Historically, such models have considered…

Methodology · Statistics 2018-09-25 Shinichiro Shirota , Alan E. Gelfand , Sudipto Banerjee

Citizen science databases that consist of volunteer-led sampling efforts of species communities are relied on as essential sources of data in ecology. Summarizing such data across counties with frequentist-valid prediction sets for each…

Methodology · Statistics 2023-11-28 Elizabeth Bersson , Peter D. Hoff

The latent position cluster model is a popular model for the statistical analysis of network data. This approach assumes that there is an underlying latent space in which the actors follow a finite mixture distribution. Moreover, actors…

Computation · Statistics 2013-08-23 Nial Friel , Caitriona Ryan , Jason Wyse

Reconstructing pathogen dynamics from genetic data as they become available during an outbreak or epidemic represents an important statistical scenario in which observations arrive sequentially in time and one is interested in performing…

Populations and Evolution · Quantitative Biology 2020-02-04 Mandev S. Gill , Philippe Lemey , Marc A. Suchard , Andrew Rambaut , Guy Baele

Accurate biodiversity monitoring is essential for effective environmental policy, yet current practices often rely on arbitrarily defined ecosystems, communities, and ad-hoc indicator species, limiting cost-efficiency and reproducibility.…

Applications · Statistics 2025-12-02 Braden Scherting , Otso Ovaskainen , Tomas Roslin , David B. Dunson

Spatial fields in the Earth and environmental sciences are often available at multiple scales or resolutions. While coarse-scale data (e.g., from global circulation models) are often abundant, they lack the local detail provided by…

Methodology · Statistics 2026-04-01 Alejandro Calle-Saldarriaga , Paul F. V. Wiemann , Matthias Katzfuss

The latent position cluster model is a popular model for the statistical analysis of network data. This model assumes that there is an underlying latent space in which the actors follow a finite mixture distribution. Moreover, actors which…

Computation · Statistics 2017-02-02 Caitriona Ryan , Jason Wyse , Nial Friel

Biodiversity research requires complete and detailed information to study ecosystem dynamics at different scales. Employing data-driven methods like Machine Learning is getting traction in ecology and more specific biodiversity, offering…

Quantitative Methods · Quantitative Biology 2025-10-27 Stylianos Stasinos , Martino Mensio , Elena Lazovik , Athanasios Trantas

Joint modeling of spatially-oriented dependent variables is commonplace in the environmental sciences, where scientists seek to estimate the relationships among a set of environmental outcomes accounting for dependence among these outcomes…

Methodology · Statistics 2021-03-22 Lu Zhang , Sudipto Banerjee , Andrew O. Finley

So-called 'citizen science' data elicited from crowds has become increasingly popular in many fields including ecology. However, the quality of this information is being frequently debated by many within the scientific community. Therefore,…

Applications · Statistics 2020-05-27 Edgar Santos-Fernandez , Kerrie Mengersen