Related papers: The Shape of Symmetric Binary Trees
These notes are a written version of my talk given at the CARMA workshop in June 2017, with some additional material. I presented a few concepts that have recently been used in the computation of tree-level scattering amplitudes (mostly…
Binary relations derived from labeled rooted trees play an import role in mathematical biology as formal models of evolutionary relationships. The (symmetrized) Fitch relation formalizes xenology as the pairs of genes separated by at least…
A tanglegram $\cal T$ consists of two rooted binary trees with the same number of leaves, and a perfect matching between the two leaf sets. In a layout, the tanglegrams is drawn with the leaves on two parallel lines, the trees on either…
Three standard subtree transfer operations for binary trees, used in particular for phylogenetic trees, are: tree bisection and reconnection ($TBR$), subtree prune and regraft ($SPR$) and rooted subtree prune and regraft ($rSPR$). For a…
We improve the lower bound on the extremal version of the Maximum Agreement Subtree problem. Namely we prove that two binary trees on the same $n$ leaves have subtrees with the same $\geq c\log\log n$ leaves which are homeomorphic, such…
In a rooted tree, we call a vertex {\em balanced} if it is at equal distance from all its descendant leaves. We count balanced vertices in three different tree varieties. For decreasing binary trees, we can prove that the probability that a…
To each link $L$ in $S^3$ we associate a collection of certain labelled directed trees, called width trees. We interpret some classical and new topological link invariants in terms of these width trees and show how the geometric structure…
Given two $n$-vertex graphs $G_1$ and $G_2$ of bounded treewidth, is there an $n$-vertex graph $G$ of bounded treewidth having subgraphs isomorphic to $G_1$ and $G_2$? Our main result is a negative answer to this question, in a strong…
In this paper, we study how to draw trees so that they are planar, straight-line and respect a given order of edges around each node. We focus on minimizing the height, and show that we can always achieve a height of at most 2pw(T)+1, where…
We consider spanning trees of $n$ points in convex position whose edges are pairwise non-crossing. Applying a flip to such a tree consists in adding an edge and removing another so that the result is still a non-crossing spanning tree.…
It is known that the size of the largest common subtree (i.e., the maximum agreement subtree) of two independent random binary trees with $n$ given labeled leaves is of order between $n^{0.366}$ and $n^{1/2}$. We improve the lower bound to…
The study of patterns in permutations associated with forests of binary shrubs was initiated by D. Bevan et al.. In this paper, we study five different types of rise statistics that can be associated with such permutations and find the…
This is a survey article on trees, with a modest number of proofs to give a flavor of the way these topologies can be efficiently handled. Trees are defined in set-theorist fashion as partially ordered sets in which the elements below each…
We consider random binary trees that appear as the output of certain standard algorithms for sorting and searching if the input is random. We introduce the subtree size metric on search trees and show that the resulting metric spaces…
In SODA'99, Chan introduced a simple type of planar straight-line upward order-preserving drawings of binary trees, known as LR drawings: such a drawing is obtained by picking a root-to-leaf path, drawing the path as a straight line, and…
We prove a fix point theorem for monoids of self-embeddings of trees. As a corollary, we obtain a result by Laflamme, Pouzet and Sauer that a tree either contains a subdivided binary tree as a subtree or has a vertex, and edge, an end or…
For the exactly solvable model of exponential last passage percolation on $\mathbb{Z}^2$, it is known that given any non-axial direction, all the semi-infinite geodesics starting from points in $\mathbb{Z}^2$ in that direction almost surely…
In this paper we investigate undirected discrete graphical tree models when all the variables in the system are binary, where leaves represent the observable variables and where all the inner nodes are unobserved. A novel approach based on…
Diestel and M\"uller showed that the connected tree-width of a graph $G$, i.e., the minimum width of any tree-decomposition with connected parts, can be bounded in terms of the tree-width of $G$ and the largest length of a geodesic cycle in…
A \emph{binary tanglegram} is a drawing of a pair of rooted binary trees whose leaf sets are in one-to-one correspondence; matching leaves are connected by inter-tree edges. For applications, for example, in phylogenetics, it is essential…